Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso20g01820	ATGCACATTATGAAAACCAGATCAAGATCGGAGGTGAGCCGGAGAGCAAGGCATATACTCCGGTTAGCCTTGTTATGGGCGCGAAAAGGTGGAGTCTTTGTTGTGAAGAAGAGGCTAATGCATGATCTATCTCATTTTGTCAAGAGCCATGGTCAATCTAAAAAGGGCAATGGTGCACTCCAATGTGGCGACCGGCAGCTATCTTTTGATGCAACACCTATAATCCATGTCCGGATGCATCGGCCCAACTCAATGCGCTTCCGATTGCCTCACATCCCTTGCATCAATCCGCACGTTGATTGTTCGGATATGTTTGAGTTTGATGATGAGAGTGATATTCGGTACTCATGTTGTGAAGCAAGAAAGAGTTTCTTGATTGGTAATGGTGATGAATGTGAAGATGATGAATGTTATGAAGAAGTTTGTGAGGAACAAGAAATGGGAATTGATCTCAAGGCTGAAGAGTTTATAGCCAACTTCTATGAGCAGCTTAAGCTTCAAAGGCAACTCAACACAAAAAGAATAACAAGCGACTAA	537	43.02	MHIMKTRSRSEVSRRARHILRLALLWARKGGVFVVKKRLMHDLSHFVKSHGQSKKGNGALQCGDRQLSFDATPIIHVRMHRPNSMRFRLPHIPCINPHVDCSDMFEFDDESDIRYSCCEARKSFLIGNGDECEDDECYEEVCEEQEMGIDLKAEEFIANFYEQLKLQRQLNTKRITSD	178

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso20g01820	178	PANTHER	AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED	11	171	-	-
	Smso20g01820	178	Pfam	Cotton fibre expressed protein	148	174	IPR008480	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso20g01820	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	346429	Smso20g01820	Smso1g03596
	429035	Smso1g03596	Smso20g01820

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4969648	Smso	Smso20g01820	Smso-Chr20:61591798	Smso28g00495	Smso-Chr28:13766624
	5025346	Smso	Smso1g03596	Smso-Chr1:121130576	Smso20g01820	Smso-Chr20:61591798
	5078006	Smso	Smso20g01820	Smso-Chr20:61591798	Smso28g00494	Smso-Chr28:13763691
	5078189	Smso	Smso20g01820	Smso-Chr20:61591798	Smso29g01588	Smso-Chr29:42919224