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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso20g01964 ATGGAGTCAACGGATTGTGGGTATAACTATTTATGGTCATTTGAAAAAAAGGGTACTCAGGAAATTTGTGTTTGTGATGAAAATTTGAAGATGAAATCTGATAGCTTTCAAGTGGACATGGAGTCCTTCTCACATCTCACCAACAAAGATGATGCACATAATTCAAGATTTAATTTGCCAAGAAGTTTATCCAGAAAAGGAGAAGAGAAGAAGATGAGTAATCCAAGAGTTGACAATGAGAAAGATGCTATCTTTTCACCTAAAGGGACCAACGAGCCACAACACCACCATCAAATTACCATCATCACTACGGCTGTCGCCGCCACGGGAACACCAACGAAAAGCCTACTCGGCGGCAAAAGATCAAGTAGTTTCAAACAAACATCGATCATCAACCCTACAAGAATCTTGTTCTTCTTTGCCACATTGTCAAGCATGGGAACCATTCTGCTGATATACTTCACCCTCTCCATGGCCAAACATAACAAAGACAACAACTTGCTCGATTAA 510 40.2 MESTDCGYNYLWSFEKKGTQEICVCDENLKMKSDSFQVDMESFSHLTNKDDAHNSRFNLPRSLSRKGEEKKMSNPRVDNEKDAIFSPKGTNEPQHHHQITIITTAVAATGTPTKSLLGGKRSSSFKQTSIINPTRILFFFATLSSMGTILLIYFTLSMAKHNKDNNLLD 169
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso20g01964 169 MobiDBLite consensus disorder prediction 54 85 - -
Smso20g01964 169 PANTHER OS04G0672300 PROTEIN 14 164 - -
Smso20g01964 169 MobiDBLite consensus disorder prediction 54 95 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso20g01964 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr19:83060908 Smso20g01964 Smso-Chr20:64595239 dispersed
Smso Smso-Chr1:116775372 Smso20g01964 Smso-Chr20:64595239 transposed
Smso Smso-Chr20:64595239 Smso29g01702 Smso-Chr29:44707180 wgd