Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso21g01320	ATGTGTGGAATAGCACTAATTATCTCCGGTGTTCGTATCGATTTATCGTCTCTTCTTCCAGATGCAACCAATTGCTCATCTCTCCCTCAACAATCTGAAACTCTTTTATTTTGTGTAGATGATATAAAAGCAGGTCTGAGGAAAAGGGGACCTGACAGTTTAGGAATTAAGTCTATATTCCTTGATGCTCATGAGGGAAGATTTCTTCGATCTTCAGTGGAGGTAGAAGAACCAGCCGACTTAACAGATAATTTTATTTTATTTGTTGGTGCTACATTGCAGTTAAGGGGAGTATATCCAATCACACAACCTTTGGTGGACAAATCTGGGAATATCCTTGTGTATAATGGTGAGGTGTTTGGAGGAATTGAGCTCAGTAATGATAGTAATGATGCTGAAGTTCTCATTGAGTCTTTGAGTAAATGTTGCAACTGCCTTTCTCATGAACATGATGGCACATGTTCTTCTGGGAAGTACTCTGTTCCTGAGTTTCTTTCAAAAATCAAGGGGCCATGGGCTTTAATCTACTGGCAGGAGAGCTCAAAGACAATATGGTTTGGAAGAGATGCACTTGGAAGGCGAAGCCTTCTTGTTCATTGGCCAAATATAAAAGACTCCCGACTCATGCTTTCTTCTGTAGCACCACCTTATGCTATTAATGAAAATTCTGATTTTGTATATGAAAATGGGCCAAGTGAACCAAGCTTTTGGGAAGAGCTCCCATGTGCAGTGTACAGCTTGTCCATGAATGCTTCAAAAATGGATGGAAATCTTGTGTGTGAGGTCAAAAGACATAATTGGCATGACCCCTTGCTGCAAGAACTGATTAAGTGGGATAGGACTCTTGTGGAACCCACACCTGAAAGTTTAATTGAAGTTCATAAAACGTATTCTAGCGAGGAACGAGTGCATTTGCATCAGAAAGTTCTGGCTGCACTTAAAGAATCTGTGAGACGGCGCACAATATTTTCAGGAATTCATCGGGGCAATGCTCCAGTGGCTGTGCTTTTTTCTGGTGGATTAGATTCTATGATACTTGCAGCATTGCTGGATGAGTGCTTAGACCCAAAATATGAAATTGATCTGTTGAATGTGAGTTTTGATGGTCAGTTAGCCCCAGATAGAATCTCTGCTAGGGCAGGTGTGAACGAGCTTAGAAAAATTGCCACCCTAAGAAGATGGAATCTGGTAGAGATAGATGCAGAATTATCAAAATTGACCTGGGAGACAAAGCATGTCATGTCACTTATTAATCCCTCCAATACATACATGGACCTTAATATTGGAATTGCCTTGTGGTTGGCAGCTGGCGGTGATGGGTGGGTGAGTGAAGAAATTGGAGAGAATAATAAAAACGATTCAGAATGCCAGCGTGTGAAGTACAAGTCTGAGTCCAGGATTTTGTTGGTTGGTTCTGGTGCAGACGAGCAATGTGCTGGTTATGGCCGCCATAAAACTAAATACAAACAAAGCAGTTGGGTGGGGCTAAATGAAGAAATGAAATTAGATATGCAGAGAATATGGAAGAGAAACCTAGGTAGAGATGATAGATGCATTGCTGATAATGGCAAAGAGGCTAGATTTCCTTTTCTAGATGAGGATGTAATAAGGCTACTACTCGATATTCCACTGTGGGAAATTGCAGACCTTCGCCAACCAAGTGGAGTTGGAGATAAAAAAATCTTGCGTGAGGTTGCAAGAATGCTTCACTTGCAGGAAGCAGCTGGTCTACCTAAAAGAGCTATTCAGTTCGGTTCAAGAATCGCCAGGGAATCAAACCGTAAGAATTTTGGAAGTAATCGGGCTGCAAATCAAGCTTCTGCTGGAAGTGCACTCTTTCAACCACTATGA	1851	41.49	MCGIALIISGVRIDLSSLLPDATNCSSLPQQSETLLFCVDDIKAGLRKRGPDSLGIKSIFLDAHEGRFLRSSVEVEEPADLTDNFILFVGATLQLRGVYPITQPLVDKSGNILVYNGEVFGGIELSNDSNDAEVLIESLSKCCNCLSHEHDGTCSSGKYSVPEFLSKIKGPWALIYWQESSKTIWFGRDALGRRSLLVHWPNIKDSRLMLSSVAPPYAINENSDFVYENGPSEPSFWEELPCAVYSLSMNASKMDGNLVCEVKRHNWHDPLLQELIKWDRTLVEPTPESLIEVHKTYSSEERVHLHQKVLAALKESVRRRTIFSGIHRGNAPVAVLFSGGLDSMILAALLDECLDPKYEIDLLNVSFDGQLAPDRISARAGVNELRKIATLRRWNLVEIDAELSKLTWETKHVMSLINPSNTYMDLNIGIALWLAAGGDGWVSEEIGENNKNDSECQRVKYKSESRILLVGSGADEQCAGYGRHKTKYKQSSWVGLNEEMKLDMQRIWKRNLGRDDRCIADNGKEARFPFLDEDVIRLLLDIPLWEIADLRQPSGVGDKKILREVARMLHLQEAAGLPKRAIQFGSRIARESNRKNFGSNRAANQASAGSALFQPL	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso21g01320	616	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	307	608	-	-
	Smso21g01320	616	CDD	Asn-Synthase-B-C	311	585	IPR001962	GO:0004066(InterPro)\|GO:0006529(InterPro)
	Smso21g01320	616	ProSiteProfiles	Glutamine amidotransferase type 2 domain profile.	2	240	IPR017932	-
	Smso21g01320	616	Pfam	Asparagine synthase	489	569	IPR001962	GO:0004066(InterPro)\|GO:0006529(InterPro)
	Smso21g01320	616	Pfam	Asparagine synthase	309	384	IPR001962	GO:0004066(InterPro)\|GO:0006529(InterPro)
	Smso21g01320	616	Gene3D	HUPs	293	611	IPR014729	-
	Smso21g01320	616	Pfam	Glutamine amidotransferase domain	102	212	IPR017932	-
	Smso21g01320	616	Gene3D	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	26	230	IPR029055	-
	Smso21g01320	616	PANTHER	ASPARAGINE SYNTHETASE DOMAIN-CONTAINING PROTEIN 1	1	613	IPR051857	-
	Smso21g01320	616	SUPERFAMILY	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	45	231	IPR029055	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso21g01320	K01953	asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	150761	Smso21g01320	Smso4g01355
	345020	Smso21g01320	Smso4g01355
	355683	Smso4g01355	Smso21g01320

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr21:13966449	Smso4g01355	Smso-Chr4:18412681	wgd