Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso26g01706 | ATGGACGCCGAGAGAGCAGCTCTTATAGCAAAGCGAAAAGAAATATCTCGATCCAAATCCAGCGTTCACGATGAATTACACAACTTTAGGTCATGGCTCCGGTGGATGTGCGTGGATCAATCTACCGGATGGACGTTTTGCCTCTCATGGTTAGTCTTCATCATATTCACCTTCGTCATTCCTCTTCTCTCCCATTTCTACCTTGCCTGCAGCAATTGCGATAATCGACACGCGAGGCCGTATGATAGCCACGTGCAGTTGTCTCTCAGCACCATTGCCACGCTTTCCTTCGTTTGCCTCTCCCAATTTGTTAGGATTTATGGACTCCGTAGGTTTCTCTTCTTCGATAAGCTTTGTGATGAAAGCGAGACCGTTCGCAGGGGTTATACCGAACAATTCAATAGCTCGCTTAAAATACTCTTCATATTTGTTGCACCATGTTTTACTGCTGAGGCTGCATATAAGATCTGGTGGTACAGTTCGGGTGCCACCGCCATTCCATTCTTGATCAATGCTGCAGTGAGTGATGCATTAGCATGCACCTTTGAACTTGCATCCTGGCTCTATAGAACTGTGGTGTTCTTCCTAGTTTGTATCCTGTTCCGCCTTATCTGTCTTCTTCAGATCCTTCGTCTCCAAGATTTCGCTCAGGTGTTCCATGTAGACTCTGATGTGGAGTCTGTGTTGAAAGAACACCTTAGGATCAGGAGGCATCTACGCATTATAAGCCACAGATACCGTGTTTTTATACTGTGGGTCCTCATCCTTGTCACCGTCAGTCAATTCACATCGCTTCTTGACACCACCCGATCCAGAGCAGATCTCAGCATCTTCAAAACTGGTGAACTTGCATTGGCTTCTGTAAGCTTGCTTACTGGGGTAATGATACTACTGAGGAGTGCCACAAGGATCACTCATAAGGCTCAAGGGGTAACATGCCTGGCTGCTAAGTGGCACGTGTGTGCAACCATTGAGTCCTTTGATCCACCAGATGCAGACACAGAAACCCCACCAACAGGTGCTAATGGAAACCAAGTTTTTCAACGTGATGCATCATTATCTGATAATGACGATGTTGGTAGCGAAGATGAGTTAGACATCACTAAACTCATACCTGCATATGCCTACAGCACCCTCTCATTCCAGAAGAGGCAGGCCTTAGGACTTCAGTGCTCACTATAG | 1182 | 46.36 | MDAERAALIAKRKEISRSKSSVHDELHNFRSWLRWMCVDQSTGWTFCLSWLVFIIFTFVIPLLSHFYLACSNCDNRHARPYDSHVQLSLSTIATLSFVCLSQFVRIYGLRRFLFFDKLCDESETVRRGYTEQFNSSLKILFIFVAPCFTAEAAYKIWWYSSGATAIPFLINAAVSDALACTFELASWLYRTVVFFLVCILFRLICLLQILRLQDFAQVFHVDSDVESVLKEHLRIRRHLRIISHRYRVFILWVLILVTVSQFTSLLDTTRSRADLSIFKTGELALASVSLLTGVMILLRSATRITHKAQGVTCLAAKWHVCATIESFDPPDADTETPPTGANGNQVFQRDASLSDNDDVGSEDELDITKLIPAYAYSTLSFQKRQALGLQCSL | 393 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso26g01706 | 393 | PANTHER | RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K | 11 | 387 | IPR021924 | - | |
| Smso26g01706 | 393 | Pfam | Protein of unknown function (DUF3537) | 24 | 387 | IPR021924 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso26g01706 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 148201 | Smso18g01673 | Smso26g01706 | |
| 148238 | Smso18g01766 | Smso26g01706 | |
| 148949 | Smso1g02365 | Smso26g01706 | |
| 431823 | Smso26g01706 | Smso29g00792 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr18:75882557 | Smso26g01706 | Smso-Chr26:27438719 | dispersed | |
| Smso | Smso-Chr26:27438719 | Smso7g00648 | Smso-Chr7:11190920 | dispersed | |
| Smso | Smso-Chr26:27438719 | Smso29g00792 | Smso-Chr29:11612444 | wgd |