AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso26g01706 ATGGACGCCGAGAGAGCAGCTCTTATAGCAAAGCGAAAAGAAATATCTCGATCCAAATCCAGCGTTCACGATGAATTACACAACTTTAGGTCATGGCTCCGGTGGATGTGCGTGGATCAATCTACCGGATGGACGTTTTGCCTCTCATGGTTAGTCTTCATCATATTCACCTTCGTCATTCCTCTTCTCTCCCATTTCTACCTTGCCTGCAGCAATTGCGATAATCGACACGCGAGGCCGTATGATAGCCACGTGCAGTTGTCTCTCAGCACCATTGCCACGCTTTCCTTCGTTTGCCTCTCCCAATTTGTTAGGATTTATGGACTCCGTAGGTTTCTCTTCTTCGATAAGCTTTGTGATGAAAGCGAGACCGTTCGCAGGGGTTATACCGAACAATTCAATAGCTCGCTTAAAATACTCTTCATATTTGTTGCACCATGTTTTACTGCTGAGGCTGCATATAAGATCTGGTGGTACAGTTCGGGTGCCACCGCCATTCCATTCTTGATCAATGCTGCAGTGAGTGATGCATTAGCATGCACCTTTGAACTTGCATCCTGGCTCTATAGAACTGTGGTGTTCTTCCTAGTTTGTATCCTGTTCCGCCTTATCTGTCTTCTTCAGATCCTTCGTCTCCAAGATTTCGCTCAGGTGTTCCATGTAGACTCTGATGTGGAGTCTGTGTTGAAAGAACACCTTAGGATCAGGAGGCATCTACGCATTATAAGCCACAGATACCGTGTTTTTATACTGTGGGTCCTCATCCTTGTCACCGTCAGTCAATTCACATCGCTTCTTGACACCACCCGATCCAGAGCAGATCTCAGCATCTTCAAAACTGGTGAACTTGCATTGGCTTCTGTAAGCTTGCTTACTGGGGTAATGATACTACTGAGGAGTGCCACAAGGATCACTCATAAGGCTCAAGGGGTAACATGCCTGGCTGCTAAGTGGCACGTGTGTGCAACCATTGAGTCCTTTGATCCACCAGATGCAGACACAGAAACCCCACCAACAGGTGCTAATGGAAACCAAGTTTTTCAACGTGATGCATCATTATCTGATAATGACGATGTTGGTAGCGAAGATGAGTTAGACATCACTAAACTCATACCTGCATATGCCTACAGCACCCTCTCATTCCAGAAGAGGCAGGCCTTAGGACTTCAGTGCTCACTATAG 1182 46.36 MDAERAALIAKRKEISRSKSSVHDELHNFRSWLRWMCVDQSTGWTFCLSWLVFIIFTFVIPLLSHFYLACSNCDNRHARPYDSHVQLSLSTIATLSFVCLSQFVRIYGLRRFLFFDKLCDESETVRRGYTEQFNSSLKILFIFVAPCFTAEAAYKIWWYSSGATAIPFLINAAVSDALACTFELASWLYRTVVFFLVCILFRLICLLQILRLQDFAQVFHVDSDVESVLKEHLRIRRHLRIISHRYRVFILWVLILVTVSQFTSLLDTTRSRADLSIFKTGELALASVSLLTGVMILLRSATRITHKAQGVTCLAAKWHVCATIESFDPPDADTETPPTGANGNQVFQRDASLSDNDDVGSEDELDITKLIPAYAYSTLSFQKRQALGLQCSL 393
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso26g01706 393 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 11 387 IPR021924 -
Smso26g01706 393 Pfam Protein of unknown function (DUF3537) 24 387 IPR021924 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso26g01706 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
148201 Smso18g01673 Smso26g01706
148238 Smso18g01766 Smso26g01706
148949 Smso1g02365 Smso26g01706
431823 Smso26g01706 Smso29g00792
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr18:75882557 Smso26g01706 Smso-Chr26:27438719 dispersed
Smso Smso-Chr26:27438719 Smso7g00648 Smso-Chr7:11190920 dispersed
Smso Smso-Chr26:27438719 Smso29g00792 Smso-Chr29:11612444 wgd