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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso26g01859 ATGGAGAAGCAAAAGATTGTGGTGAAGGTGAGCATGAACGGCGACAAGAAAGCTCGTAAAGCTTTGAAGATCGCCGTTAGTATCTCCGGGGTTGAATCGGCGTCTTTTGTTGGGTCAGATAAGGACCAGATAGCGGTGACTGGTGCAGGCATTGACTCCGTTGAACTCACGACGTTACTAAGGAAAAAGGTTGGATACACAGAGCTAGTGAGCGTCGGTCCGGTCGAGGTGAAGAAACCGGAATCGAAGCCGGCCGAGGTGAAGGTGCAAGTGGATCCATACCAGTACTACTACTATGGCTATGCCATGCCTTATTATACTTATGTTTATCAGTATTGA 339 48.08 MEKQKIVVKVSMNGDKKARKALKIAVSISGVESASFVGSDKDQIAVTGAGIDSVELTTLLRKKVGYTELVSVGPVEVKKPESKPAEVKVQVDPYQYYYYGYAMPYYTYVYQY 112
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso26g01859 112 Gene3D - 1 77 - -
Smso26g01859 112 PANTHER OS04G0464100 PROTEIN 4 88 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso26g01859 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr11:72008223 Smso26g01859 Smso-Chr26:35740898 dispersed
Smso Smso-Chr26:35509053 Smso26g01859 Smso-Chr26:35740898 dispersed
Smso Smso-Chr26:35740898 Smso7g01065 Smso-Chr7:28873625 dispersed
Smso Smso-Chr26:35733049 Smso26g01859 Smso-Chr26:35740898 tandem