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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso26g01952 ATGAGGAAGCTCTACAGCCACAATAAAGGCAAGATCCACCCATCACCACCGCCCAACGCCGCCACCACCACCACGGATCACTTATCCATCCTACCGTTGGCAATAGCAGCTCTCGCCGCCTCCTTGGCACCGGAAGACAAAGAAGTCTTGGCATACCTTCTCTCTTGCTCTCTAACCACCCCCACCACCAACAACATCAATAACAACTTCTCCAAAACCACCGACAAAACTGGCGGCGGAAATCATCCTCCGAAATTCAACTGCTACTGTTTTTCATGTTACACTAGTTACTGGGTCCGTTGGGATGTTTCGCCGGACCGACAACTGATTCATGAAATTATTGATGCTTATGAAGATGGATTGGTTAAAAACAAGAGGAGTGGGAAGAACAAGAAAGAGAGAAAGAAGAACAAGGTTTCACCCTCTTCAGATTCTCCACACGCGCCGGAAGAAGTTTCTCACGCGCCGCCGCAAGTGGAGGAGAACAGGGGAAAGGATTTGGGTTGTTTGGTCATTGAGGCGTCACCAGATAAAGGACCAGTAAGAAAAATTGTAAATTTTTTAGGGGAAAGGATTTGGGGTGTTTGGGGGGTTTGA 597 48.07 MRKLYSHNKGKIHPSPPPNAATTTTDHLSILPLAIAALAASLAPEDKEVLAYLLSCSLTTPTTNNINNNFSKTTDKTGGGNHPPKFNCYCFSCYTSYWVRWDVSPDRQLIHEIIDAYEDGLVKNKRSGKNKKERKKNKVSPSSDSPHAPEEVSHAPPQVEENRGKDLGCLVIEASPDKGPVRKIVNFLGERIWGVWGV 198
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso26g01952 198 PANTHER F12F1.11-RELATED 1 197 - -
Smso26g01952 198 MobiDBLite consensus disorder prediction 125 164 - -
Smso26g01952 198 MobiDBLite consensus disorder prediction 1 23 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso26g01952 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
142997 Smso10g03341 Smso26g01952
147093 Smso16g01644 Smso26g01952
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr10:88604566 Smso26g01952 Smso-Chr26:41885007 dispersed
Smso Smso-Chr16:78325124 Smso26g01952 Smso-Chr26:41885007 dispersed
Smso Smso-Chr23:9269236 Smso26g01952 Smso-Chr26:41885007 dispersed
Smso Smso-Chr26:41885007 Smso5g00679 Smso-Chr5:14049052 dispersed
Smso Smso-Chr13:5983212 Smso26g01952 Smso-Chr26:41885007 wgd