Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso26g01986	ATGAAGACGCCATTGATGATAATATTCATGCTCATTTTAATGGCGGAAACCATTAAAGGAGAAGACCCTTACAGGTTCTTCAACTGGAATGTCACTTATGGTGACATCTACCCCCTTGGAGTAAAACAACAGGGGATATTGATTAACGGCCAGTTTCCGGGGCCGCAAATCGATGCAGTGACTAATGATAATGTGATTGTTAGTATTTACAACAGCTTGGATCAACCCTTCCTGATTACCTGGAATGGGATACAACAAAGGAGGAATTCATGGCAGGATGGAGTGTACGGCACGAATTGCCCCATTCCACCCCGCCAGAATTTCACCTACATTCTTCAATTCAAGGATCAAATCGGGAGCTACTTTTACTTCCCGTCCCTCGCATTTCACCGGGCGGCTGGAGGTTACGGCGGCATTACCATTTCCAGCCGTCCGATGATCCCCGTCCCGTTCCCTCCACCAGCTGGAGACTTCACTATTCTCGCGGGTGATTGGTTCAAGCAAAATCACACTGATTTGAAAGCGATTTTGGACAGCGGACATGATCTTCCGTTTCCCGACGGTCTTCTCATCAACGGCCGTGGATCTAACGGATTTACGTTCAATGTTGATCAAGGGAAAACTTACAGGATGAGGATTTCGAACGTGGGGCTTACAACCGCGATCAATTTCAGAATCCAGGGCCATAAAATGCTGTTGGTGGAGGTCGAAGGGACGCATGCTCTTCAGAACACATATTCTTCGCTTGATATCCATTTGGGCCAAACGTATTCGGTTTTGGTTATCGCGGATCAACCGCTGCAGAACTATTACATGGTTGTCTCCACTAGATTCACCTCTCAAGTCCTCACTGCAACCTCCATTCTTCATTACAGCAACTCGCCGGGAACTTTTCCAGCTCCTCCACCTGGTGGTCCGACCATCCAAATCGACTGGTCTTTAAATCAAGCCCGGTCAATTAGGCAAAACTTGACCGCAAGTGGTCCGAGGCCTAACCCACAGGGTTCATACCATTACGGGATGGTTAACTTCACCCGAACCATCAGGCTCGCCAACTCGGCTCCTGTGATAAATGGCAAGCAGCGGTACGCAGTCAACAGCGTGTCATTTATACCGGCTGACACCCCTCTAAAGGTTGCTGATTATTTCAAGATCTCCGGTGTGTTTTCCATTGGAACAATTTCCGATAGCCCCACCGGCGGTGGCGGTTACCTCCAGACGTCGGTCATGGCCGCCGATTTCAGAGGGTTTGCTGAGATCGTGTTTGAGAATTCAGAAGATACCGTGCAGTCATGGCACATTGATGGCCACTTCTTCTTTGTCGTCGGGATGGATGGAGGGCCGTGGTCCGTTGCTAGCAGAGCAAGTTACAATTTAAGAGACGGGATTTCACGATCTACTGTTCAGGTATATCCGAAATCTTGGACCGCATTGTACGTACCATTAGACAATGTCGGAATGTGGAATATAAGATCTCAGAATTGGGTGCGACAATACTTGGGTCAACAGTTTTACCTTCGGGTTTATTCACCGGTGAATTCGTGGAGAGATGAGTACCCGATTCCGAAGAATGCTATTACTTGCGGCCGAGCAAGCGGTCGCAAGACTAGGCCCCTATAA	1620	48.46	MKTPLMIIFMLILMAETIKGEDPYRFFNWNVTYGDIYPLGVKQQGILINGQFPGPQIDAVTNDNVIVSIYNSLDQPFLITWNGIQQRRNSWQDGVYGTNCPIPPRQNFTYILQFKDQIGSYFYFPSLAFHRAAGGYGGITISSRPMIPVPFPPPAGDFTILAGDWFKQNHTDLKAILDSGHDLPFPDGLLINGRGSNGFTFNVDQGKTYRMRISNVGLTTAINFRIQGHKMLLVEVEGTHALQNTYSSLDIHLGQTYSVLVIADQPLQNYYMVVSTRFTSQVLTATSILHYSNSPGTFPAPPPGGPTIQIDWSLNQARSIRQNLTASGPRPNPQGSYHYGMVNFTRTIRLANSAPVINGKQRYAVNSVSFIPADTPLKVADYFKISGVFSIGTISDSPTGGGGYLQTSVMAADFRGFAEIVFENSEDTVQSWHIDGHFFFVVGMDGGPWSVASRASYNLRDGISRSTVQVYPKSWTALYVPLDNVGMWNIRSQNWVRQYLGQQFYLRVYSPVNSWRDEYPIPKNAITCGRASGRKTRPL	539

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso26g01986	539	Gene3D	-	340	536	IPR008972	-
	Smso26g01986	539	Pfam	Multicopper oxidase	30	144	IPR011707	GO:0005507(InterPro)
	Smso26g01986	539	FunFam	Monocopper oxidase-like protein	341	538	-	-
	Smso26g01986	539	Pfam	Multicopper oxidase	374	511	IPR011706	GO:0005507(InterPro)\|GO:0016491(InterPro)
	Smso26g01986	539	Pfam	Multicopper oxidase	157	294	IPR001117	-
	Smso26g01986	539	PANTHER	MULTI-COPPER OXIDASE	25	505	IPR045087	GO:0016491(PANTHER)
	Smso26g01986	539	Gene3D	-	24	145	IPR008972	-
	Smso26g01986	539	SUPERFAMILY	Cupredoxins	20	171	IPR008972	-
	Smso26g01986	539	CDD	CuRO-1-AAO-like-1	26	141	IPR034273	GO:0005507(InterPro)
	Smso26g01986	539	SUPERFAMILY	Cupredoxins	151	331	IPR008972	-
	Smso26g01986	539	Gene3D	-	156	330	IPR008972	-
	Smso26g01986	539	FunFam	Monocopper oxidase-like protein	155	329	-	-
	Smso26g01986	539	SUPERFAMILY	Cupredoxins	341	530	IPR008972	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso26g01986	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr20:640398	Smso26g01986	Smso-Chr26:43116082	dispersed
	Smso	Smso-Chr22:57819352	Smso26g01986	Smso-Chr26:43116082	dispersed
	Smso	Smso-Chr22:57829820	Smso26g01986	Smso-Chr26:43116082	dispersed
	Smso	Smso-Chr26:43116082	Smso5g01881	Smso-Chr5:101740860	dispersed
	Smso	Smso-Chr13:4962218	Smso26g01986	Smso-Chr26:43116082	wgd
	Smso	Smso-Chr18:72442884	Smso26g01986	Smso-Chr26:43116082	wgd
	Smso	Smso-Chr26:43116082	Smso9g00741	Smso-Chr9:17264472	wgd