Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso26g02002	ATGAGTCAAATTAGCAGAAAAATGTGGGGAATAAACCTGAAGAGAACAATCATCTGGCGGGTGGCTTTTCTCCGGCGATGTGCTCGATCTTTGTGGCATCAAATTCTTGCTTGTTGGATCGGAAAATCAGTCCGGTACCGGCAGTTGTTAAATTCCGGTACCATTCCGACGTCTCATAGGTATATTCCTCCGGCGGAGAGGACAACGACGGTTGATCATGATGCTTGTAGCGGCGATCGGTTCACGTCCGGTGAAATGACGTCATCTTTGGGCGGGTGTGATTATGATGTTGAGCAAGAGGCTTCTGATTTGGTATCATTGAAGATCAGTTTGTTGGGTGATCATCAAATCGGCAAAACAAGCTTTTTGGCAAAATACATTGGGAAAGAAAAGAATCAAGAAGAATTAGCAGCTAAAAGAATAGATCACATGGATAAAACCCTGTGTATCAAAGGAGCCAGAATCTCATATAACATATGGGAAGTCAGTGGTGATGCAATATATCCAGATAGCGATTCAAGGACTCTCATTCCTACGGCATGTAAGGACGCTGTAGCAATCTTGTTCATGTTTGATCTAACAAGTCGCCGAACGCTTAACAGTGTTATCAACTGGCATCAGCAAGCTAGGAATTATAATCAGACCGCGATTCCAGTAATGGTCGGTAGCAAATTTGATGAGTTTGTCGAGCTTCCGTTAGATTTACAATGGACGATCGCAAGTGAGGCAAGGGCGTACGCGAAGGCCATAAACGCAACCTTGTTCTTCTCGAGCGCGTCTTACAACATAAATGTAAATAAAATCTTCAAGTTTGTTACTGCAAAGCTCTTTGATTTGTCATGGACTCTGGAACGTAATCTTACAGTTGGCGAGCCTATTATTGATTTCTAG	891	43.1	MSQISRKMWGINLKRTIIWRVAFLRRCARSLWHQILACWIGKSVRYRQLLNSGTIPTSHRYIPPAERTTTVDHDACSGDRFTSGEMTSSLGGCDYDVEQEASDLVSLKISLLGDHQIGKTSFLAKYIGKEKNQEELAAKRIDHMDKTLCIKGARISYNIWEVSGDAIYPDSDSRTLIPTACKDAVAILFMFDLTSRRTLNSVINWHQQARNYNQTAIPVMVGSKFDEFVELPLDLQWTIASEARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLSWTLERNLTVGEPIIDF	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso26g02002	296	Gene3D	-	94	286	IPR027417	-
	Smso26g02002	296	SMART	rab-sub-5	107	279	-	-
	Smso26g02002	296	PANTHER	-	105	295	-	GO:0003924(PANTHER)\|GO:0005525(PANTHER)
	Smso26g02002	296	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	107	287	IPR027417	-
	Smso26g02002	296	Pfam	Ras family	108	275	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Smso26g02002	296	ProSiteProfiles	small GTPase Rab1 family profile.	94	296	-	-
	Smso26g02002	296	PRINTS	Transforming protein P21 ras signature	148	170	-	-
	Smso26g02002	296	PRINTS	Transforming protein P21 ras signature	214	227	-	-
	Smso26g02002	296	PRINTS	Transforming protein P21 ras signature	107	128	-	-
	Smso26g02002	296	PRINTS	Transforming protein P21 ras signature	254	276	-	-
	Smso26g02002	296	FunFam	Septum-promoting GTP-binding protein 1	97	286	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso26g02002	K07976	Rab family, other

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr23:65860311	Smso26g02002	Smso-Chr26:44395591	dispersed
	Smso	Smso-Chr26:44395591	Smso27g00323	Smso-Chr27:4890494	dispersed
	Smso	Smso-Chr13:4239565	Smso26g02002	Smso-Chr26:44395591	wgd