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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso26g02011 ATGGCGAACAAATCTGCGGTTATGGCTTCATCATTAACCGGAGAAGCCTTCGAATCGATCGACGTTGACGTATCCGACTCCGATTCGTGGCAGGTTGTTGATCCGTCTGATTCCGACGACGGAAACTTCTCTTACGGTGACGTCACCACCATCACAACCGACGATGACGACGAAGTTGAGTCGGATGTCGATGATCTCCTTCAACATCCTTACGGATCTATGCAGTCTCTAGTAGATGAAATCACTCATCACTGTCAGGAACTTAAACACGCATATGAAATCGATCACAGCCATCAGACAGTTGACATCGACGCCGTCGTTGAGATCGATCATCCGTATGAAGAGGAAGGAGATAAAAGTGAAGAAGACGAAGAAGATGATGATGATTCGGATTTGGACGACGAACTGGTGCCGAAATGGTTGAATAACAGATTCGAGAGGCAGAGGATGAGGAAATTGGGGAAAAAGGTGTATCCAAAGATGAAAAAGTCGAAAAGATTGGCTAATCAGTATAACAAACCTGGATGTGTTCATGGAAAGCATGGGTTAGGAATGAAACACAATGTCAGCTGGTAA 576 45.14 MANKSAVMASSLTGEAFESIDVDVSDSDSWQVVDPSDSDDGNFSYGDVTTITTDDDDEVESDVDDLLQHPYGSMQSLVDEITHHCQELKHAYEIDHSHQTVDIDAVVEIDHPYEEEGDKSEEDEEDDDDSDLDDELVPKWLNNRFERQRMRKLGKKVYPKMKKSKRLANQYNKPGCVHGKHGLGMKHNVSW 191
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso26g02011 191 MobiDBLite consensus disorder prediction 151 179 - -
Smso26g02011 191 MobiDBLite consensus disorder prediction 25 50 - -
Smso26g02011 191 MobiDBLite consensus disorder prediction 115 134 - -
Smso26g02011 191 MobiDBLite consensus disorder prediction 25 59 - -
Smso26g02011 191 PANTHER VID27-LIKE PROTEIN 1 188 - -
Smso26g02011 191 MobiDBLite consensus disorder prediction 151 167 - -
Smso26g02011 191 MobiDBLite consensus disorder prediction 114 138 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso26g02011 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
431882 Smso26g02011 Smso29g00264
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr13:3982805 Smso26g02011 Smso-Chr26:45049941 wgd
Smso Smso-Chr26:45049941 Smso29g00264 Smso-Chr29:4248736 wgd