AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso26g02087 ATGCCGCCGGACCCACGTCACTCCAATCCAACCCCCCGTGAAAACCACATCCAACAGAAATCCCCCTTTCATTTCATCTTCAATAATCGATTAGGGTTTGAGTCGGGGATGTTGACCAGCGGAGGTGGAGGAACCTTTTACTGGTTCAGAAATGACGAATCTTCATCGGAACTCCAAGGAATCGTTGTGATTTTCGGTTGGGGGTCGATTCAATTGAAGAATTACATAAATCTTTACTCGTCTCGTGGATGGAATTCTCTCGTTGTTGTTTCCAATTTTTTCAATCCATTTTTTCCTGAGAGAGCCACTTCACTTGCATTTTCCGTCCTCAATGAGCTTCTAGAGGAGTTGAGGGCTAGACCATGTCCTTTAGTTCTTGCATCTTTTTCTGGTGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATCATTGAAGGTACATGTGAAGCACATCTTAATCTGGATGATAATCGTTTAATCATGATGGCCTGCATCTCTGGTCAAATGTATGACTGGTCCTGTCAATGTAACCGGTGA 537 43.39 MPPDPRHSNPTPRENHIQQKSPFHFIFNNRLGFESGMLTSGGGGTFYWFRNDESSSELQGIVVIFGWGSIQLKNYINLYSSRGWNSLVVVSNFFNPFFPERATSLAFSVLNELLEELRARPCPLVLASFSGGSQACMYKVFQIIEGTCEAHLNLDDNRLIMMACISGQMYDWSCQCNR 178
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso26g02087 178 PANTHER UNCHARACTERIZED 16 171 IPR008547 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso26g02087 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr26:48108133 Smso8g01512 Smso-Chr8:28612711 dispersed
Smso Smso-Chr26:48108133 Smso29g00297 Smso-Chr29:4832685 wgd
Smso Smso-Chr26:48108133 Smso7g00256 Smso-Chr7:4523661 wgd