Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso28g00391	ATGGCGACAATCCACCAAAATTTTCTCCCAAATAACCTTCAGTTAGTTCCCAGTAAACCTCTACTCAAACACACACCTCCAAACAATCGTATCTTCATACGTTCTACATCATTGCACAAAAACTTTAACAGCAGATTATCTGTCAGTACTAATGTTAAATCATCGTTTGATTACAACCATAACGGAGTTCACACGAGCAATGATCACTACGAGTACGAGAAAGGTTTAATTGGAAACGGTCAGCAATACCCTAGACCGACGGAAGTTCCGTGGAAGAAGGAATTGTGTAATTCCGTTCAACTTATCGGAACCGTTGGTACTCCGGTTGAGTTTAAGCAGCTTAGCTCCGGGAAAGTCCTCGCCTGGTGTCGCCTCGCCGTCAAAAAATCGGCCACTGATACTACGTGGATCAATTTGACATTTTGGGATGAGGTGGCACATATTGCTTCTCAGCATTTGGAAAAAGGACAACAAATATATGTATTGGGCCGTCTTGTTTCAGATACAGTCGATAGTGATGATGGAAAGCAACAAACATACTATAAGGTAGTTGTTCAACAGCTAAAATTTGTCGAGAGAAGCCCGCCTTCAGCCCCATCTAATGATGGAGACTTCAACTACAATTACAATTCCAACTCCAACTCCAACTCGAGCTCTATGACAACAGGTAGAAAGCAAAAGAATTATGCAGCAAATGGTACAGGATCCGTAGAGGAACTATGGCAAGCATTTTTTGCTAATCCTGCTGATTGGTGGGATAATAGGAAGAACAAGAGAAGCCCGAATTATCCGGATTTCAAGCACAAAGACACGGGTGAAGCTTTATGGGTCGAAGGGCGGTTCAATCCATCCTGGGTTAAGTCTCAGTTATCTGTATTAGATTCCCGAATGGAATCTTTTCACGATCAAACTGCTAATGCGCGCTCAGATTCCATGTTTGGAGACCACTTGCCACCTTATTAA	963	42.58	MATIHQNFLPNNLQLVPSKPLLKHTPPNNRIFIRSTSLHKNFNSRLSVSTNVKSSFDYNHNGVHTSNDHYEYEKGLIGNGQQYPRPTEVPWKKELCNSVQLIGTVGTPVEFKQLSSGKVLAWCRLAVKKSATDTTWINLTFWDEVAHIASQHLEKGQQIYVLGRLVSDTVDSDDGKQQTYYKVVVQQLKFVERSPPSAPSNDGDFNYNYNSNSNSNSSSMTTGRKQKNYAANGTGSVEELWQAFFANPADWWDNRKNKRSPNYPDFKHKDTGEALWVEGRFNPSWVKSQLSVLDSRMESFHDQTANARSDSMFGDHLPPY	320

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso28g00391	320	MobiDBLite	consensus disorder prediction	193	227	-	-
	Smso28g00391	320	ProSiteProfiles	Single-strand binding (SSB) domain profile.	95	192	IPR000424	GO:0003697(InterPro)
	Smso28g00391	320	Pfam	Single-strand binding protein family	97	190	IPR000424	GO:0003697(InterPro)
	Smso28g00391	320	NCBIfam	single-stranded DNA-binding protein	96	231	IPR011344	GO:0003697(InterPro)\|GO:0006260(InterPro)
	Smso28g00391	320	MobiDBLite	consensus disorder prediction	199	227	-	-
	Smso28g00391	320	SUPERFAMILY	Nucleic acid-binding proteins	97	290	IPR012340	-
	Smso28g00391	320	PANTHER	SINGLE-STRANDED DNA-BINDING PROTEIN	54	302	IPR011344	GO:0003697(PANTHER)\|GO:0003697(InterPro)\|GO:0006260(InterPro)\|GO:0006264(PANTHER)\|GO:0009295(PANTHER)\|GO:0042645(PANTHER)\|GO:0051096(PANTHER)
	Smso28g00391	320	CDD	SSB-OBF	99	190	IPR000424	GO:0003697(InterPro)
	Smso28g00391	320	Gene3D	-	95	233	IPR012340	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso28g00391	K03111	single-strand DNA-binding protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	153301	Smso28g00391	Smso8g00295
	338035	Smso28g00391	Smso1g03759
	357452	Smso1g03759	Smso28g00391
	429129	Smso1g03759	Smso28g00391

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr28:10173756	Smso8g01549	Smso-Chr8:29727513	dispersed
	Smso	Smso-Chr1:124847865	Smso28g00391	Smso-Chr28:10173756	wgd