Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso28g00396	ATGGCTTCTTCGATGATATCCGGAGCTCAGAATCTCGCATTCGCCCCAAAAGGTCTAGGGTTTAAGTTTAACAAATCCAATTTGGTTAGTAGAAGCTGTAATGTTCGATCTAAAACCCTAATTTTACCGAAATGCAGTGTGTCTGTACCACGGCCGGCTTCACAGCCTAGATTTATACAGCATAAGAAAGAGGCGTTTTGGTTTTATAGGTTTTTATCGATTGTGTATGATCATGTGATAAACCCTGGGCATTGGACTGAGGATATGAGAGATGATGCATTGGAACCGGCTGATCTTAATAGCCGTGATCTGACGGTGGTGGATGTTGGTGGTGGCACAGGGTTTACTACTTTGGGGATTGTGGAACATGTGGATGCTAAGAATGTGACGATTTTGGATCAGTCGCCGCATCAGCTTGCGAAAGCTAAGGAGAAGGTGGATTTGAAGGAGTGCAGGATTATTGAGGGAGATGCTGAGGATCTTCCGTTTGAGACTGATTATGCTGAGAGATATGTGTCTGCTGGAAGCATTGAGTACTGGCCCGACCCACAACGAGGCATCAAAGAAGCATACAGGGTTATAAAGAAAGGAGGGAAGGCTTGTTTAATCGGTCCTGTTTATCCAACATTTTGGCTGTCTCGTTTCTTTGCAGACATGTGGATGCTGTTTCCAAAGGAAGAAGAATATATTGAATGGTTTGAAAAGGCTGGATTTAAAGATGTGCAGATCAAGAGGATTGGCCCACAATGGTATCGTGGGGTCCGTCGCCACGGTCTCATCATGGGATGCTCGGTTACAGGTGTCAAACCCACATCAGGGGATTCTCCATTGCAGCTTGGTCCTAAAGTTGAGGACGTAGAAAAGCCCGTAAACCCATTTTTATTTCTTGTACGGTTCCTTCTTGGAGCCTCGGCTGGTGTCTACTACGTACTGGTCCCTATCTACATGTGGCTCAAGGACCAGATTGTGCCGAAAGGTCAACCAATCTGA	990	45.56	MASSMISGAQNLAFAPKGLGFKFNKSNLVSRSCNVRSKTLILPKCSVSVPRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPADLNSRDLTVVDVGGGTGFTTLGIVEHVDAKNVTILDQSPHQLAKAKEKVDLKECRIIEGDAEDLPFETDYAERYVSAGSIEYWPDPQRGIKEAYRVIKKGGKACLIGPVYPTFWLSRFFADMWMLFPKEEEYIEWFEKAGFKDVQIKRIGPQWYRGVRRHGLIMGCSVTGVKPTSGDSPLQLGPKVEDVEKPVNPFLFLVRFLLGASAGVYYVLVPIYMWLKDQIVPKGQPI	329

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso28g00396	329	CDD	AdoMet-MTases	105	203	-	-
	Smso28g00396	329	Gene3D	Vaccinia Virus protein VP39	69	260	IPR029063	-
	Smso28g00396	329	PANTHER	2-METHYL-6-PHYTYL-1,4-HYDROQUINONE METHYLTRANSFERASE, CHLOROPLASTIC	1	329	IPR044649	GO:0051741(InterPro)
	Smso28g00396	329	ProSiteProfiles	MPBQ-MBSQ family SAM-binding methyltransferase profile.	57	266	IPR031164	GO:0032259(InterPro)
	Smso28g00396	329	Pfam	Methyltransferase domain	107	201	IPR013216	GO:0008757(InterPro)
	Smso28g00396	329	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	76	255	IPR029063	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso28g00396	K12502	MPBQ/MSBQ methyltransferase [EC:2.1.1.295]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	141673	Smso10g00784	Smso28g00396
	149530	Smso20g00910	Smso28g00396
	338032	Smso28g00396	Smso1g03751
	357455	Smso1g03751	Smso28g00396
	429123	Smso1g03751	Smso28g00396

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:124620496	Smso28g00396	Smso-Chr28:10328473	wgd
	Smso	Smso-Chr10:8349013	Smso28g00396	Smso-Chr28:10328473	wgd
	Smso	Smso-Chr20:15612630	Smso28g00396	Smso-Chr28:10328473	wgd