Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso28g00413	ATGTACTACAAAAAGCGACCCGAGCTTATGAAACTGGTTGAAGAGTTATACAGAGCATATCGGGCCTTAGCCGAAAGATATGATCATGCAACCGGGGCCCTCCGCCAGGCCCACAAAACAATGAGTGAAGCCTTCCCAAATCAAGTCCCCGCAGGGTGTGACGACTCAGCACCTGATTCTCCCTATGATACTGATCCTCAGACCCCAGACTCAAAAGCCACCACAATTTCATGTTTTGACCCTGATGACTTGCAGAAAGACGGGTCAACAGGAACAGCAAGAAAAGCCCTCAATTTCAGTGATTCAGAAGATGTCAACAATAATAAAAACGGGATACACGATCGAAAGCTCTCTCGGTTCCAGAGTGTAGGTGTGAATGATAAAGAGATCTTATTATTAAAAGAAGCCCTAGCCAAATTAGAAGATGAAAAAGAAGCTGGATTAAAGCAGTACATCGAGAGTTTGGATAAATTATCCAAACTTGAATCCGAGATCTTAAAATCGCAAGAAGAATCTAAAGAACTCGCTGACCGGGCAAGCAAAGCCGAGGCTGAATCCCAAAAATTGAAAGACATGCTGCAAAAACTAGAAGCTGAAAAAGAGGAAAGTCTTGAACTTTACCATCAGGCCCAAAAGAAAATTGAGGAAATTGATGAGCAACATTTGAAGAAAGAAATCAGTGGATTAAAAGATGAAAGAGATGCTGCTTATGATCAGTATAAACAGTCTTTGAATCTGATATCAGATTTGGAGAAGAAATTACTAGAAGCGAAGAACGAAATTGAAACATTGAAGCTATCAATTGCTAAATTAACCGAAGAGAAAGAAGCACAAACGATTTTATACCAGAAATGCATGGAGACTATCGCGAGTCTTGAACTTAGACTCGTTTGTGCACAAGAAGAAACCGGAAGACTGAAAACTGAAATCGATAATGGAGTTCTACTTTTAAAGGGTGCAGAAGAACAACGATTAATGCTAGAAAAGTCAAACAAGAGTCTTCACATGGAATTGGAGTCAATGGGGGTCAAAATAGAGAGTCAAAATCAAGAAATTACCGATAAACAGAAGGAATTGGGGAGGTTATGGACTTGTATACAAGAAGAGCGGATACGGTTTGTGGAGGCTGAAACCGCTTTCCAAACTTTACAACAATTACACGCTCAATCTCAAGAAGAATTAAGATCAATGGCAGGAGAGTTACAAACCAGGGCCCAGATCTTACGGGAAATTGAAGCTCGTAATGAAGTTTTAGAAGGAGAGATACATAAGCAAATTGAGGAGAACAAGAATCTTAATGTGCTAAACTTATCTTCTGGCATTTCATTGAAAGAAATGCAGTCGGAGATCAGTAGCTTAAAAGAAGTCAATGGGAAGCTTGAGGAAGAGGTTGACCTTCGAGTTGACCAAAGAAATGCTCTTCAGCAAGAAATATACTGTTTAAAAGAGGAACTAAATGAATTGAACAAGAAGCACGGATCAATTTTGGAGCAAGTTACTTCTATCGGGATGAACCCGGAAAGCTTCAGGTCATCTGTAAAGGAGTTGCAAGATGAAAACTTGAATTTGAAAAAAGAATGGGAAATAGAAAAGGCTGCAAAAGAAGCTTTACTAGAGAAATTGGAAATCATGGGTCAACTTCTTGAGAGAAATGTTGTTTTGGAGAATTCTTTATCAGATTTGGGTGCTGAATTAGAAGGGGTGAGAGAGTCTGATATTGAGGATGCAAAGGGTGGTGAATCTGTAACCATGGAGCGAGATGCATTTGTTGAGTTGCAGGATCTTCAAAGTAAGGTTAAAGTAATTGAAATGGCAGTAGTCGAAATGCAAATGCGGTCAGTGCAACAGAAGTTACATTCAGATGCAAAGCTAGAAACTGCAATGAAGCAGATCGAAGAATTGAGTTCTCAAAAGTATCCCCGCAGACCAAACGGTCAACCAAAGTCAAGATCAGAAATATCAGAAGCAGACCCGAAAGATATCATGCTGGATGAAGCCTCGGAATGTTCATCATACGGTGTAAGCAAACGAGGAACAATCGACGGTGAGATCTGGGAAACCGTGAACGACTCCAAAACCATGTTCAAACACAATCCAACCGCTTCCGATGTGTCTCTCGATAACATAGTGGATAAGATAGAAGTTTCTAGAAAATTCAACAAATCTCGTGATGATGAAAGCAAGAGGAAAGTTCTAGAGCGACTGAACTCCGATGTTCTAAGGTTAACCAATCTTCAAATTACAATCGAGGATTTGAAACGGAAAGTCGAGATCACATTACAGAGCAGACGGGGAAAAGCAATGATCGAATGCGAGACACTAAAAGGCCAGCTCATGGAAGCTGAAACCGCTATCCAGAAACTATACGAGCTGAACGGGAAATTTGTAAAACAACTAGAAGGTATAGACGACGGTGGAGAGAGTGAAAGCATGAGAAGAAAAAAGGTGTCGGATCAAGCACGACGGGTGTCGGAAAAGATCGGTCGGTTGCAGTTAGAGATACAAAAGATACAGTTTGTGTTGTTGAAACTCGACGATGAAACCGAAGCTGCTGGAAAAACGAGGTTTCTGGACAGCAGTAAACGGGTTCTGTTGAAAGATTATCTTTACGGTGGTGGGAGAACGAAAGCCACAGTTAGCAGCAGGCGGAAGAAAGGCCATTTCTGTGCGTGTGTCGAGCCTTCAACTAAAGGCGATTGA	2700	41.07	MYYKKRPELMKLVEELYRAYRALAERYDHATGALRQAHKTMSEAFPNQVPAGCDDSAPDSPYDTDPQTPDSKATTISCFDPDDLQKDGSTGTARKALNFSDSEDVNNNKNGIHDRKLSRFQSVGVNDKEILLLKEALAKLEDEKEAGLKQYIESLDKLSKLESEILKSQEESKELADRASKAEAESQKLKDMLQKLEAEKEESLELYHQAQKKIEEIDEQHLKKEISGLKDERDAAYDQYKQSLNLISDLEKKLLEAKNEIETLKLSIAKLTEEKEAQTILYQKCMETIASLELRLVCAQEETGRLKTEIDNGVLLLKGAEEQRLMLEKSNKSLHMELESMGVKIESQNQEITDKQKELGRLWTCIQEERIRFVEAETAFQTLQQLHAQSQEELRSMAGELQTRAQILREIEARNEVLEGEIHKQIEENKNLNVLNLSSGISLKEMQSEISSLKEVNGKLEEEVDLRVDQRNALQQEIYCLKEELNELNKKHGSILEQVTSIGMNPESFRSSVKELQDENLNLKKEWEIEKAAKEALLEKLEIMGQLLERNVVLENSLSDLGAELEGVRESDIEDAKGGESVTMERDAFVELQDLQSKVKVIEMAVVEMQMRSVQQKLHSDAKLETAMKQIEELSSQKYPRRPNGQPKSRSEISEADPKDIMLDEASECSSYGVSKRGTIDGEIWETVNDSKTMFKHNPTASDVSLDNIVDKIEVSRKFNKSRDDESKRKVLERLNSDVLRLTNLQITIEDLKRKVEITLQSRRGKAMIECETLKGQLMEAETAIQKLYELNGKFVKQLEGIDDGGESESMRRKKVSDQARRVSEKIGRLQLEIQKIQFVLLKLDDETEAAGKTRFLDSSKRVLLKDYLYGGGRTKATVSSRRKKGHFCACVEPSTKGD	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso28g00413	899	Coils	Coil	408	428	-	-
	Smso28g00413	899	MobiDBLite	consensus disorder prediction	633	651	-	-
	Smso28g00413	899	Pfam	KIP1-like protein	1	28	IPR011684	GO:0003779(InterPro)
	Smso28g00413	899	Coils	Coil	742	762	-	-
	Smso28g00413	899	Coils	Coil	282	302	-	-
	Smso28g00413	899	Coils	Coil	592	612	-	-
	Smso28g00413	899	Coils	Coil	771	791	-	-
	Smso28g00413	899	Coils	Coil	158	274	-	-
	Smso28g00413	899	MobiDBLite	consensus disorder prediction	46	92	-	-
	Smso28g00413	899	Coils	Coil	130	150	-	-
	Smso28g00413	899	Coils	Coil	513	544	-	-
	Smso28g00413	899	ProSiteProfiles	Networked (NET) actin-binding (NAB) domain profile.	1	34	IPR011684	GO:0003779(InterPro)
	Smso28g00413	899	MobiDBLite	consensus disorder prediction	61	75	-	-
	Smso28g00413	899	MobiDBLite	consensus disorder prediction	633	660	-	-
	Smso28g00413	899	Coils	Coil	443	463	-	-
	Smso28g00413	899	PANTHER	PROTEIN NETWORKED 4A	220	603	IPR051861	-
	Smso28g00413	899	Coils	Coil	471	491	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso28g00413	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	149666	Smso20g01622	Smso28g00413
	338025	Smso28g00413	Smso1g03734
	357462	Smso1g03734	Smso28g00413
	429105	Smso1g03734	Smso28g00413
	429659	Smso20g01622	Smso28g00413

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr28:11034178	Smso9g01135	Smso-Chr9:51887211	dispersed
	Smso	Smso-Chr1:124085910	Smso28g00413	Smso-Chr28:11034178	wgd
	Smso	Smso-Chr20:53686744	Smso28g00413	Smso-Chr28:11034178	wgd
	Smso	Smso-Chr28:11034178	Smso29g01425	Smso-Chr29:39327033	wgd