AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso28g00422 | ATGAAGGTTCATCCGGCGCCAAATAGGCGAAACATCACCGTCCGGTACGATTTCGGTTCCCAATCCAACGCCGCCGCTGCTATTTTCCGTCAAAGGAAGCTCCGGCGACTCCCTCACATCTTCGGAAAAGTCCTCGAGCTTCCGTTTTACTCCGACGCCGACGTTTCAATTCTGGAAACGTCTGATTCGTTGAAATTTGTTGTCGATACAGACAACGATATCGGTACCGACATCGCTGCTCATACTATCGAGATCTGTCCCGGCGTGACCAAAGTTGTTGTGAGCATCGGTGATTCTAGCGGTGATGTTAACGAGATGAAGCTAGATTTGTGGCGGTTTAGGCTGCCGGAGTCCACGCATCCGGAGCTTGCTACGGCGGCGTTTAGTGATGGAGAGCTTGTGGTTACTGTACCTAAGGATGTTAATTTGGAGAGAAATCAAGAGGTTTGGGGTGAAGGTAACGGAACTGGACGGTTTGTTTTGGTACAGTAG | 492 | 50.2 | MKVHPAPNRRNITVRYDFGSQSNAAAAIFRQRKLRRLPHIFGKVLELPFYSDADVSILETSDSLKFVVDTDNDIGTDIAAHTIEICPGVTKVVVSIGDSSGDVNEMKLDLWRFRLPESTHPELATAAFSDGELVVTVPKDVNLERNQEVWGEGNGTGRFVLVQ | 163 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso28g00422 | 163 | CDD | ACD-sHsps-p23-like | 57 | 139 | - | - | |
| Smso28g00422 | 163 | PANTHER | 17.6 KDA CLASS II HEAT SHOCK PROTEIN-RELATED | 1 | 163 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso28g00422 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 141645 | Smso10g00764 | Smso28g00422 | |
| 147367 | Smso17g00267 | Smso28g00422 | |
| 149524 | Smso20g00882 | Smso28g00422 | |
| 153303 | Smso28g00422 | Smso4g02496 | |
| 338022 | Smso28g00422 | Smso1g03726 | |
| 357465 | Smso1g03726 | Smso28g00422 | |
| 429100 | Smso1g03726 | Smso28g00422 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr28:11304473 | Smso4g02873 | Smso-Chr4:95682040 | dispersed | |
| Smso | Smso-Chr1:123854639 | Smso28g00422 | Smso-Chr28:11304473 | wgd | |
| Smso | Smso-Chr10:8171025 | Smso28g00422 | Smso-Chr28:11304473 | wgd | |
| Smso | Smso-Chr17:2905505 | Smso28g00422 | Smso-Chr28:11304473 | wgd | |
| Smso | Smso-Chr20:15175705 | Smso28g00422 | Smso-Chr28:11304473 | wgd | |
| Smso | Smso-Chr28:11304473 | Smso4g02496 | Smso-Chr4:44600230 | wgd | |
| Smso | Smso-Chr28:11304473 | Smso8g00297 | Smso-Chr8:4139200 | wgd |