AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso28g00439 ATGCAAGAAAAGGGCAAACAAGATGATGGTTTGGGCCCTCTTGGCATTTGCCATAGGCTATTCAATTTCATCATGAATAGCATTACTCGCGGTACAAGACACATTGCATTGGGTACAAGCAATACAACATCACCTCAAGACAACGAAACTCGATCTTTTGAAGCTAGTCATACGAGCCAAAACGAGGTGACCAGGCCCGAAAGTCATGAACTACTAGTTGAGTTTAGACACACCAACGGGCCAATAGTTAATCGAACTAGTAACACTTCGGGTCAAATCTTGGTCCAAGAAAATAGGAATTTAACACGAGCCCGTAAGGAAACGGATTCGCAAGATCGTGGTAAGGGCAATGGTGATAGCGGGAAAGCAACGGAAAAGTCAACGTTGACCATTGTAGATGGTGAGAATTTGCCTGGAAGGAAGCCTCATCTTCTGAGTGTTGCTTCAAATATAAATGAGAAAGCTGATGCATTCATAAGGAGCAGAAAGGAAGCCATGGAGAAGACTTTAAACATGAAACAGACAAATGATGTGTAA 537 42.64 MQEKGKQDDGLGPLGICHRLFNFIMNSITRGTRHIALGTSNTTSPQDNETRSFEASHTSQNEVTRPESHELLVEFRHTNGPIVNRTSNTSGQILVQENRNLTRARKETDSQDRGKGNGDSGKATEKSTLTIVDGENLPGRKPHLLSVASNINEKADAFIRSRKEAMEKTLNMKQTNDV 178
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso28g00439 178 MobiDBLite consensus disorder prediction 37 66 - -
Smso28g00439 178 MobiDBLite consensus disorder prediction 100 120 - -
Smso28g00439 178 MobiDBLite consensus disorder prediction 82 99 - -
Smso28g00439 178 MobiDBLite consensus disorder prediction 82 128 - -
Smso28g00439 178 MobiDBLite consensus disorder prediction 37 62 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso28g00439 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
338012 Smso28g00439 Smso1g03702
357475 Smso1g03702 Smso28g00439
429085 Smso1g03702 Smso28g00439
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr1:123400184 Smso28g00439 Smso-Chr28:11702646 wgd