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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso28g00489 ATGGCAGATTTGAAGACCGGAGTGTACAAAGGTGTAAAAAGATACTGGCGGAGGAGAAGCTACCGCCGCCTCGCCACCACCACCACCGATGAATTCCGATCAAAGCCGCGGAAATGGTCGTGGAAGATACGGATGCCACGCAGGCTGAAGATAAGGTTTAGCCCTAAGAAGTTGATTGCTAGGGTTCATGATGCGTACGTTAGAATGATGATGAGGGTGGCGAGTTCGCTGGTGGTGAGGACCGGAGTAGTAGGAGGGTACGGTGGTGGAGGGTTCGGTGAGTTTGGGATGAGACCCGTTAAGGAATATGATGAGAAGATGATAATTCAGATGTATAACTCGATGGTGGTGAGGCAGGCCCAACTGAAAGCAGTTGAACAGTGTTCTTGA 390 50.51 MADLKTGVYKGVKRYWRRRSYRRLATTTTDEFRSKPRKWSWKIRMPRRLKIRFSPKKLIARVHDAYVRMMMRVASSLVVRTGVVGGYGGGGFGEFGMRPVKEYDEKMIIQMYNSMVVRQAQLKAVEQCS 129
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso28g00489 129 PANTHER BNAA09G40010D PROTEIN 7 124 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso28g00489 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337981 Smso28g00489 Smso1g03600
357506 Smso1g03600 Smso28g00489
429038 Smso1g03600 Smso28g00489
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4958542 Smso Smso17g00155 Smso-Chr17:1705267 Smso28g00489 Smso-Chr28:13693751
4984971 Smso Smso28g00489 Smso-Chr28:13693751 Smso8g00166 Smso-Chr8:2177400
5027956 Smso Smso1g03600 Smso-Chr1:121236314 Smso28g00489 Smso-Chr28:13693751
5035779 Smso Smso10g00666 Smso-Chr10:6961655 Smso28g00489 Smso-Chr28:13693751
5077956 Smso Smso20g00770 Smso-Chr20:13424631 Smso28g00489 Smso-Chr28:13693751