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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso28g00505 ATGGAGATGCAGATTCAAGATGAACAGTTTTTGAGTCCAGCAGTTAAAGCAACATTTTGTCTTGGATCTGAAACGCACACGATTGAAGCTTGCAAGGGGATTCTTTTGGATCAATTGGTTTTCGTGAAAGGAGAAAGCATGAGCATATTGAAAGAATTCATCACCAAGCATAATGTTCCAAATGATGTCCCAGATGAAGTTTCATCCGAAGATGACGATGACGATGATGGTGAGGGGCCCACAGTCAAGTCAAAGAAGATTAGAACAGAATAG 273 40.66 MEMQIQDEQFLSPAVKATFCLGSETHTIEACKGILLDQLVFVKGESMSILKEFITKHNVPNDVPDEVSSEDDDDDDGEGPTVKSKKIRTE 90
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso28g00505 90 PANTHER T2E6.7-RELATED 1 88 - -
Smso28g00505 90 MobiDBLite consensus disorder prediction 59 90 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso28g00505 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337975 Smso28g00505 Smso1g03588
429030 Smso1g03588 Smso28g00505
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4967734 Smso Smso1g03588 Smso-Chr1:120997671 Smso28g00505 Smso-Chr28:14004707
4969644 Smso Smso20g01815 Smso-Chr20:61436714 Smso28g00505 Smso-Chr28:14004707
4984984 Smso Smso28g00505 Smso-Chr28:14004707 Smso29g01584 Smso-Chr29:42877016
5002819 Smso Smso28g00503 Smso-Chr28:13979982 Smso28g00505 Smso-Chr28:14004707