Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso28g00520 | ATGAGGCTTCAATTTCGAAGTCCAGTGAAACTTGTTTTGCTAATTTGCTTCTGCTGGTGGCCAATTGTTGAATCTCAAATATCTAATCCTCTACCAAAGCCTGCAAGGGCTCTTGATGCAACCCTACAAGACTATGCATTTCGTGCGTTTATTAATCCGCGTACTGGTATTCCCTTTGATGGAATTGTCCCGCCATATTTGACAGGAATTGAGATATCAGCAATGAGGCTCAGAAGCGGTAGTCTGTATCGTCGAGGCGTTAAAACCTTTAAAGAGTTCTTAATTCCGGTTGGTTTAAGAGAGCAGCCTTATGTGGAGCGACTTGTTCTGGTGTATCAAAATTTAGGAAATTGGTCCACAACTTATTACTCTTTACCTGGTTATGTTTATCTAGCTCCGATATTAGGTCTTCTTGCTTATAATGGTTCAGATTTGTCAGCTTCTAATATACCAGAACTTGACTTGTGGGCTTCTGAGGAAGTCATTACGATAAATTTTGGAAGAATACGCCCCATACCAGTTGGTTCGGTTGCAAAGTGTGCTTGGTTTGATCTACATGGTCAGGTGAATCTCACAAACTTGTTATCTGGGAATGTATGTTCAACCACTGAACAGGGGCATTTCTCCATTGTGGCTGAATCAGCTGTCCCTCCTGTTCCAGTACCTCCTGCACCACCAGAAACTGCACCATCTGAACCTGCACACAGTAGTAGAAAGAACAATGAGCCTAGGGTTTGGGGTATTATTGGCGCGGTAACTGGTGGAACTGCATTGTTGGTGTTGTTGGCATTGTTGATATTGTGGGCTTGGCGTTACAAAAAGAGAAAACGAATGCGTGAGTTAGAAAGGGCTGCAGATGCTGGTGAAGCATTGAGGATGACCAGAATTGGGAGCATGAGAGCACCATTTGCATTGGCCACAAGAACAATGCCGAATTTTGAAAGCGACTTTGGTGCTTGA | 960 | 43.44 | MRLQFRSPVKLVLLICFCWWPIVESQISNPLPKPARALDATLQDYAFRAFINPRTGIPFDGIVPPYLTGIEISAMRLRSGSLYRRGVKTFKEFLIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYVYLAPILGLLAYNGSDLSASNIPELDLWASEEVITINFGRIRPIPVGSVAKCAWFDLHGQVNLTNLLSGNVCSTTEQGHFSIVAESAVPPVPVPPAPPETAPSEPAHSSRKNNEPRVWGIIGAVTGGTALLVLLALLILWAWRYKKRKRMRELERAADAGEALRMTRIGSMRAPFALATRTMPNFESDFGA | 319 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso28g00520 | 319 | Pfam | Protein of unknown function (DUF1191) | 34 | 212 | IPR010605 | - | |
| Smso28g00520 | 319 | PANTHER | PROTEIN, PUTATIVE (DUF1191)-RELATED | 13 | 317 | IPR010605 | GO:0016020(PANTHER) | |
| Smso28g00520 | 319 | MobiDBLite | consensus disorder prediction | 219 | 240 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso28g00520 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 147317 | Smso17g00123 | Smso28g00520 | |
| 153322 | Smso28g00520 | Smso8g00129 | |
| 337968 | Smso28g00520 | Smso1g03566 | |
| 357519 | Smso1g03566 | Smso28g00520 | |
| 429020 | Smso1g03566 | Smso28g00520 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 4984998 | Smso | Smso28g00520 | Smso-Chr28:14584588 | Smso29g01142 | Smso-Chr29:22647622 | |
| 5027940 | Smso | Smso1g03566 | Smso-Chr1:120638643 | Smso28g00520 | Smso-Chr28:14584588 | |
| 5065541 | Smso | Smso17g00123 | Smso-Chr17:1386938 | Smso28g00520 | Smso-Chr28:14584588 | |
| 5096378 | Smso | Smso28g00520 | Smso-Chr28:14584588 | Smso8g00129 | Smso-Chr8:1755635 |