Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso28g00616	ATGTGGGAATTAAAGATAGCGGAAGGGAATGGACCCTATTTATATAGTACAAATAACTTTGTTGGTAGACAATTTTGGGAATTTAATCCAGATGCTGGAACTTTTGAGGAGAAAGAAGAAGTGGAAAGGGTACGACAGAACTTTCGAAATAGCCGAAAAAATGGAGGATTTCATGCTTGTGGTGATCTACTAATGCGACGACAGCTAATAAAGGAAAATGGAATCGATGTTACAAGCATACCTCCGATACGACTAAGTGAAAGCGAGAAAGTGGATTTTGAAGGTGTTACAATTGCGGTCAAGAAAGGTGTAAGACTACAACGTGCAATCCAAGCTAAAGACGGACATTGGCCGGCTGAAAATGCTGGCCCCATGTTTTTCACCCCTCCACTTTTAATTGCCTTGTACATCAGTGATACCATTAATACAGCCTTGACCGATGAACACAAGAAAGAGATGATAAGATACTTCTACAATCATCAGAATAGTGACGGGGGATGGGGGTTTTATATCCAGGGCCACAGCACCATGATTGGATCTGCATTGAGTTATGTAGCCTTACGAATACTAGGAGAGGGAGAAGATGACGGGGATGGTGCTATCGCTAGAGCTCGCAAGTGGATACTTGACCACGGAGGTGCATCCTCTATTCCCTCTTGGGGAAAGGTTTATCTTTCGGTTCTGGGAGTGTATGAATGGGAAGGCTGCAATCCATTGCCACCAGAATTTTGGATCTTCCCCTCGGCCTTCCCTTTTCATCCAGCTGAGATGTGGTGCTACTGTCGGACAACCTACATGCCCATGTCGTACTTATATGGGAAACGAATCCAAGGACCAATAACACAACTTGTTTTGTCATTACGAAAAGAAATCCACCCCACCATTTTTGAGGATATTAACTGGAATAAACAGCGGAATAACTGTTGTAAGGAGGATTTCTACTATCCACATTCATTTCTTCAAGATGCACTGTGGCATAGTCTACATTACCTTACTGAGCCAGTTCTCAAGTATTGGCCGTTTTCTAAACTTAGAGAGAGATCTATTGATAGAGTTGTTGAACTAATGCGCTATGAGTCAGAAGAGACTAGATACATGACCATAGGATGTGTTGAAAAAAGTCTACAAATGATGTGTTGGTGGGCAGAGAATCCAAATGGGGATGAGTTCAAATATCACCTAGCTAGAGTACCTGATTACTTATGGATTGCAGAAGATGGAATGACAATGCACAGTTTTGGTAGTCAAGTGTGGGATTGCACTCTTGCAGTTCAAGCAATTACTGCAAGTAATATGGCTGAGGAATATGAAGATTGTCTCAAAAAGGCCCACTTTTACTTGAAAGAATCACAGGTGAAACAAAATCCTTCGGGAAATTTCACTAAAATGTGTCGACAGTTTACTAAAGGATCGTGGACTTTCTCTGATCAAGATCATGGATGGACCGTCTCAGATTGTACATCAGAGGCACTAAGGTGTTTAATGTTATTATCACACATGCCAAAAGAAATAGCTGGAGACAAGGATGATCCTGCCCGACTCTACGAGGCAGTGAACGTCCTTCTTTACTTGCAAAGTCCTGTAACTGGAGGATTTTCTGTTTGGGAGCCACCAATCCCAAAACCATTTCTACAGCTTCTTAATCCTTCAGAGATATTTGCAGATATTGTTGTTGAGAAAGAGCATGTGGAAACCACAGCTTCTATTATCGGAGCTCTGGTAGAATTCACGCGTCTCCACCCAAGACACAGAAAGGAAGAAATAGCACTTTCAATTTCAAAAGGAGTACGATATCTTGAGGAAACACAATGGCATGATGGTTCATGGTATGGTTACTGGGGTGTATGCTTCATATATGGAACATTCTTTGCTTTAAGGGGCTTAAGTTCCACTGGAAAGACATATGACAACAGTGTAGCAGTCCGTAAAGGAGTCAAATTCTTACTTTCAATACAGAATGAAGAAGGGGGTTGGGGAGAAAGCCACATATCTTGCCCTACTGAGCTGGAAGGAAACCGAACAAATCTGGTGCAGACATCCTGGGCAATGCTTGGTCTTATGTTTGGTGAACAAGTTGAAAGAGATCCAACACCTTTACACAGAGCAGCAAAGCTTTTGATTAATGCTCAAATGGATAATGGAGATTTTCCTCAACAGGAAATTACGGGAGTCTACATGAAGAATTGTCTGCTGCTTTATGCACAATACAGAAACATATTTCCACTCTGGGCACTTGGGGAGTATCGTAAACGTGTATGGGTGGATGTTATCCAAATGGGATCCGCGTGTTTCAAATCTGAGTCCTCGCTCGCTTGGACCAAACCAAATGGTTTTAAGCGGATGGGGCCTTATAACGGACTTGGGCCAAATGGATCAGTTAGTGATCATACTAAACTGGACAATGCTATTCTTGGGCCTGTTGCAACACCCACATCACATCATCTGACTCAACTGCGTAACCAACTCTTGTGTTATGTACCATTAGAACCTTGCTTACATGTGGCCGTAGAACCAGCCCGTATGGCAATTTCCCATTCCTTAGCCGGAAAGATATGTGGCCATGAAAGGCGAAGGAAGGCTGGAAGTCAAGATGAGGAAGATTACGAGGACGATGGGACCATGGTAGTATTCTTTCTACAATTACCTCAAGACGGGTTCATACCGGAGTACGCCACTCGTGGTCAGAGGAGAGCCCGGAGGGAACTTTCCCGACGATTTGTGATCTTGGGAGATGTCCTTTACAAAAGGTCACTCGCCCTTCCGAAATAA	2769	43.01	MWELKIAEGNGPYLYSTNNFVGRQFWEFNPDAGTFEEKEEVERVRQNFRNSRKNGGFHACGDLLMRRQLIKENGIDVTSIPPIRLSESEKVDFEGVTIAVKKGVRLQRAIQAKDGHWPAENAGPMFFTPPLLIALYISDTINTALTDEHKKEMIRYFYNHQNSDGGWGFYIQGHSTMIGSALSYVALRILGEGEDDGDGAIARARKWILDHGGASSIPSWGKVYLSVLGVYEWEGCNPLPPEFWIFPSAFPFHPAEMWCYCRTTYMPMSYLYGKRIQGPITQLVLSLRKEIHPTIFEDINWNKQRNNCCKEDFYYPHSFLQDALWHSLHYLTEPVLKYWPFSKLRERSIDRVVELMRYESEETRYMTIGCVEKSLQMMCWWAENPNGDEFKYHLARVPDYLWIAEDGMTMHSFGSQVWDCTLAVQAITASNMAEEYEDCLKKAHFYLKESQVKQNPSGNFTKMCRQFTKGSWTFSDQDHGWTVSDCTSEALRCLMLLSHMPKEIAGDKDDPARLYEAVNVLLYLQSPVTGGFSVWEPPIPKPFLQLLNPSEIFADIVVEKEHVETTASIIGALVEFTRLHPRHRKEEIALSISKGVRYLEETQWHDGSWYGYWGVCFIYGTFFALRGLSSTGKTYDNSVAVRKGVKFLLSIQNEEGGWGESHISCPTELEGNRTNLVQTSWAMLGLMFGEQVERDPTPLHRAAKLLINAQMDNGDFPQQEITGVYMKNCLLLYAQYRNIFPLWALGEYRKRVWVDVIQMGSACFKSESSLAWTKPNGFKRMGPYNGLGPNGSVSDHTKLDNAILGPVATPTSHHLTQLRNQLLCYVPLEPCLHVAVEPARMAISHSLAGKICGHERRRKAGSQDEEDYEDDGTMVVFFLQLPQDGFIPEYATRGQRRARRELSRRFVILGDVLYKRSLALPK	922

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso28g00616	922	PANTHER	TERPENE CYCLASE-MUTASE FAMILY MEMBER	1	754	IPR018333	GO:0005811(InterPro)\|GO:0016104(InterPro)\|GO:0016104(PANTHER)\|GO:0016866(InterPro)\|GO:0042300(PANTHER)
	Smso28g00616	922	ProSitePatterns	Terpene synthases signature.	606	620	IPR002365	GO:0016866(InterPro)
	Smso28g00616	922	NCBIfam	squalene-oxidosqualene cyclases	100	750	IPR018333	GO:0005811(InterPro)\|GO:0016104(InterPro)\|GO:0016866(InterPro)
	Smso28g00616	922	SUPERFAMILY	Terpenoid cyclases-Protein prenyltransferases	338	753	IPR008930	-
	Smso28g00616	922	Gene3D	-	490	724	-	-
	Smso28g00616	922	FunFam	Terpene cyclase-mutase family member	389	755	-	-
	Smso28g00616	922	SFLD	Prenyltransferase Like 2	96	751	IPR018333	GO:0005811(InterPro)\|GO:0016104(InterPro)\|GO:0016866(InterPro)
	Smso28g00616	922	Gene3D	-	121	413	-	-
	Smso28g00616	922	Pfam	Squalene-hopene cyclase C-terminal domain	415	750	IPR032696	-
	Smso28g00616	922	Pfam	Squalene-hopene cyclase N-terminal domain	108	361	IPR032697	-
	Smso28g00616	922	CDD	SQCY-1	100	748	IPR018333	GO:0005811(InterPro)\|GO:0016104(InterPro)\|GO:0016866(InterPro)
	Smso28g00616	922	SUPERFAMILY	Terpenoid cyclases-Protein prenyltransferases	123	410	IPR008930	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso28g00616	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337927	Smso28g00616	Smso1g03383
	357560	Smso1g03383	Smso28g00616
	428953	Smso1g03383	Smso28g00616

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr20:9163383	Smso28g00616	Smso-Chr28:21972365	dispersed
	Smso	Smso-Chr23:20142423	Smso28g00616	Smso-Chr28:21972365	dispersed
	Smso	Smso-Chr26:9435657	Smso28g00616	Smso-Chr28:21972365	dispersed
	Smso	Smso-Chr28:21972365	Smso2g01543	Smso-Chr2:29908070	dispersed
	Smso	Smso-Chr1:116321238	Smso28g00616	Smso-Chr28:21972365	transposed
	Smso	Smso-Chr1:116295237	Smso28g00616	Smso-Chr28:21972365	wgd