AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso28g00642 ATGATTAATGGGTTTATTCAGAATGTTATCTTGAGAAATGTTGTTGAAATTGATTTGGGAATATTTGTTAATTTTTCTGGGGATGATGACTGCTTAAAGATTCCACATAGTCACTCTTTGAAAGTGCTCAAGATTAGAAGCGAGGATGGTTTAAAAATGCCTGCCTTTCCGGGTTGTTTTCCTAGCCTTCGCGTCTTTGATGTTAAGGTTTCACTTGTTGAGTCGGGCGATGATTTGATTACAAATCTGTTTCCTTGTTTACCTGCTCTGGAGCAGCTGTCTCTTGTTGGGGATTTAACCGATTGCACTGGGGAAATCTATGTTAATGTTGGTGGGGTTGCTTTAAAACGTTTGGAGTTGGAGTTATCGATTGATAATTATGATGATTGTGATGCTATGGTGGTTATTGATGCACCGAAACTAGACTACCTTAGGCTTCAAGATGGATTTCTGGCATCATACTTGGTCAAAAACAAGCCTTCAATCAGTGAAGTTAGGCTTGATGTTGGCGATTATGAGGAGGAGTTTCTTGAGTTTTTGGATGAGGTGGGTCCTACACGACTAACACGTTTCAATGAACTTTTTCAAGGTTTGGTTAATACCAAGTTTATATCGGTTTCTGCAAGTACTTTAAAGGTTGTTTTTTCACAAAGATGGAACCTACCCGTGTTGCATTCTTTGACAAAACTAGAACTCGATGTGCACACTTCTAGTTGGACACTAATGTTATACTGGCTTGAAAGTTGCCCAAATTTGAAGGTTCTCTCTTTGATTATAAAGGAGAAACCTGTAGAAGAGTTTGACATGCTAGAGGAACTCCGGTTGACCGAGGTGCCATCCTGCTTGTCATCACGCGTTAAAGAGATTGAGATACAGAGGCTCGGGAAAGTGGACGAGGAAGAAATGCTCAAGTATCTTTTGGATAATGCAAAAGTTTTAGATAAATTTACAGTCAATTCTCGCGTATATATTAAAGACGGGATTTTACAATAA 993 38.97 MINGFIQNVILRNVVEIDLGIFVNFSGDDDCLKIPHSHSLKVLKIRSEDGLKMPAFPGCFPSLRVFDVKVSLVESGDDLITNLFPCLPALEQLSLVGDLTDCTGEIYVNVGGVALKRLELELSIDNYDDCDAMVVIDAPKLDYLRLQDGFLASYLVKNKPSISEVRLDVGDYEEEFLEFLDEVGPTRLTRFNELFQGLVNTKFISVSASTLKVVFSQRWNLPVLHSLTKLELDVHTSSWTLMLYWLESCPNLKVLSLIIKEKPVEEFDMLEELRLTEVPSCLSSRVKEIEIQRLGKVDEEEMLKYLLDNAKVLDKFTVNSRVYIKDGILQ 330
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso28g00642 330 SUPERFAMILY RNI-like 17 276 - -
Smso28g00642 330 Gene3D Ribonuclease Inhibitor 28 319 IPR032675 -
Smso28g00642 330 PANTHER F-BOX-RNI SUPERFAMILY PROTEIN-RELATED 2 320 IPR050232 -
Smso28g00642 330 Pfam FBD 277 317 IPR006566 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso28g00642 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr28:25996135 Smso28g01478 Smso-Chr28:54610278 dispersed