Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso28g00653	ATGGAATGCCTGCACCGCTTTTGTAGGGAGTGCATAGACAAATCAATGAGAATGGGGTACATTTTCAAACCAAATACTGAATGTTTTTTTTCACCAACCAACGCCAATGACTTTTGTCTCTTAATCACACGTGGCAGGAACAATGAATGCCCTGCTTGTCGTGCTCATTGTGCAAGTCGTCGCTCTTTGAGGGATGACCCCAATTATGATGCCCTAATTGCAGTTTTATACCCTGATATTGATAAATCTGAGGCAGAGGAGTTTGCCTTTGATAAAGAGGAGAAAGCTCGGAATAAGCAGATCCAAGCTTCAATTGCTCAGACATCTCGGCGTCAATTAGAAGCACTGGGAAAGAAACGCACAACCGGTAAAGCAACAACTTCAGTATTTATGAGATCACACACAAACACAAGGGGAAGACGTAGGAAATCATCCGAACCACAAGGATCTGAGAATGAAGATGATGGTGTTAACAATGATGTAGAAAAAGATTCATCTTCCAGTGAGGAGCATGAACCATGTACAAAAGTAAGACCTAGAAGACAAAAGAGATGGGGAGTTGGAGTGTCTGGAGTTCGATCTTCACTACCATCTAGTAGTGCTGATGGTGGCTGTGATGACAATGATGTTGAAACACCCAATAGAGAAATGACAGGTGTTGGTACTTCAGAAATTCTAGCATGGGGTCGGGGTGGCATTAGAAGTCACACACGACATGGCAGCTTAAGCAATAGTGCTGCTAAGACTTCAAGGAACACTAGGGGTTTCCAAACTCATGGATCATATTAG	789	42.97	MECLHRFCRECIDKSMRMGYIFKPNTECFFSPTNANDFCLLITRGRNNECPACRAHCASRRSLRDDPNYDALIAVLYPDIDKSEAEEFAFDKEEKARNKQIQASIAQTSRRQLEALGKKRTTGKATTSVFMRSHTNTRGRRRKSSEPQGSENEDDGVNNDVEKDSSSSEEHEPCTKVRPRRQKRWGVGVSGVRSSLPSSSADGGCDDNDVETPNREMTGVGTSEILAWGRGGIRSHTRHGSLSNSAAKTSRNTRGFQTHGSY	262

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso28g00653	262	MobiDBLite	consensus disorder prediction	115	217	-	-
	Smso28g00653	262	MobiDBLite	consensus disorder prediction	229	262	-	-
	Smso28g00653	262	MobiDBLite	consensus disorder prediction	159	179	-	-
	Smso28g00653	262	ProSitePatterns	Zinc finger RING-type signature.	3	12	IPR017907	-
	Smso28g00653	262	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	1	77	IPR013083	-
	Smso28g00653	262	PANTHER	OS11G0578200 PROTEIN	1	19	IPR044592	-
	Smso28g00653	262	MobiDBLite	consensus disorder prediction	237	262	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso28g00653	K10695	E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	357572	Smso1g03325	Smso28g00653

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr10:1367943	Smso28g00653	Smso-Chr28:27638292	dispersed
	Smso	Smso-Chr20:2700627	Smso28g00653	Smso-Chr28:27638292	dispersed
	Smso	Smso-Chr23:11052179	Smso28g00653	Smso-Chr28:27638292	dispersed
	Smso	Smso-Chr28:27638292	Smso2g00907	Smso-Chr2:13898221	dispersed
	Smso	Smso-Chr28:27638292	Smso1g03325	Smso-Chr1:114744916	transposed