Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso28g00655 | ATGGCCACCAATTCTTTCCAATCTCTGAACTACCGCCACCGCACACCGTCACTTGGCCGACGGCGGTCACTGGACTCTCCGCCGCCGACGCTAGCACTTACCTCAAAGTCTAACGACAATTACAAGCAGACGATCGCCATCTCCTCCGCCGTAAAAACATTCTCTTTGTCCTCCTCCACCTCCGCGTCCGCCCAGACCACCTCGTTCGACCACCTCGGCCGCTTGCTCGCCGCCAAGGACTTCCCAGAAGCTGACAACGAAACGCGCCGCCTCCTAATCTCACTCGTCGGCGAAGCCGCACAGAAACGCGGATACGTCTTCTTCTCCGAAGTCCAATTCATATCGAAATCAGATCTCCAAACCATAGACCAACTGTGGAGAAGTAACAGCAATAATAAATTCGGATACGGCGTCCAGAAACGACTGTGGGAAAAATCAGACAAAGATTTCACCAGATTCTTCATAAAAGTTGGATGGATGAAGAAGCTGGACACTGAAATCTTGCAATACAACTACCGAGCTTTTCCGGATGAATTCATGTGGGAATTGAACGAGGAAACGCCAGAAGGGCACCTGCCATTGACGAATGCTCTCAGAGGAACGCAACTGCTCACTTGCATTTTAACCCATCCGACATTTGCAGATGAAGAACAAGAAGAATCTGCCATCGATGAGGAAGAAGAAAAACAACAGCTGCCAGTTGGCAAAGGACTGTTCAAAACCAATTACAGTTTTTAA | 738 | 49.46 | MATNSFQSLNYRHRTPSLGRRRSLDSPPPTLALTSKSNDNYKQTIAISSAVKTFSLSSSTSASAQTTSFDHLGRLLAAKDFPEADNETRRLLISLVGEAAQKRGYVFFSEVQFISKSDLQTIDQLWRSNSNNKFGYGVQKRLWEKSDKDFTRFFIKVGWMKKLDTEILQYNYRAFPDEFMWELNEETPEGHLPLTNALRGTQLLTCILTHPTFADEEQEESAIDEEEEKQQLPVGKGLFKTNYSF | 245 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso28g00655 | 245 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Smso28g00655 | 245 | Gene3D | - | 12 | 130 | - | - | |
| Smso28g00655 | 245 | PANTHER | TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC | 1 | 245 | IPR008629 | GO:0009507(PANTHER)|GO:0010019(PANTHER)|GO:0046906(PANTHER) | |
| Smso28g00655 | 245 | FunFam | Tetrapyrrole-binding protein, chloroplastic | 131 | 219 | - | - | |
| Smso28g00655 | 245 | Pfam | GUN4-like | 63 | 211 | IPR008629 | - | |
| Smso28g00655 | 245 | CDD | GUN4 | 71 | 208 | IPR008629 | - | |
| Smso28g00655 | 245 | SUPERFAMILY | GUN4-like | 63 | 213 | IPR037215 | - | |
| Smso28g00655 | 245 | Gene3D | - | 131 | 218 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso28g00655 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 337914 | Smso28g00655 | Smso1g03321 | |
| 357573 | Smso1g03321 | Smso28g00655 | |
| 428940 | Smso1g03321 | Smso28g00655 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr1:114628649 | Smso28g00655 | Smso-Chr28:28260751 | wgd |