AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00014 ATGGCGCGCACTAGAAAACACTCGAAGAAGAAGAAGGTTTCCTCCGAGGGTTACCGACAAAAGAAAAGTAGAAGGAATAAATCAAAGAAGCTTCGTCATCATCATGATTCCTTTTCTTCTCCTTCGGATGATGAGTCCACTTCAGAAGGTGAGTATGAACGTAAAAGGGCTCGGTCCCGTTCAAGAAATGAAACTAAGAAACGGAATAGAACATCGGAATCACCCCCTGTCAAGAAACGAAAAAGGTCTAAAAAGATCAAGAAGAAGAAGAAGAAGAAGAATTATATTACTTCTGCAAGCAGTGATTCTGGAAGCTGCTCCACTTGTAAAGATGAAGATAGCAGTAGTGATGAAATGGCTTCACATGGAGAAAACAAAAAGGATCATAGAGATTCAACCAAGGCTAGAATTGGAAACATGAGGACCTATATTTCACCAACAACTAGTTGTTATGAAAGCATTCAGAAAGTAGTCACAATGGAAAACAACCCTATGAGATTAAAATCAGTTATTACTGTTGCAAACTTAGAGAACGAAGATATGAAAAACAACGGGCTTAAAGAAGAGACTGTGTATGATTATGATGATTACCCGTCTAGTCAAACCAATGATAGCTTTAATACTTCTCCTGATAAAAAAAGTGTGGTTAAAGAAGTAAACTCAGGTTCTAACCTTGATGATGATATTAAGGAAAAGGAGAGCAATGTTTCTGGTAATATTGGATCAGAAGCGGATAATTTGGAGTTAATTTTGAGACAAAAAGCGTTAGAAAACCTAAGTAGATTCCGAGGCGGGATTAAAGTAAAACCACTAGTTTCTGTTGATGAAACTGTTAGCATGTCACAGCCAGTAATAAATAGGAGTAGGTTTACATGGAGAAGAGATCCTTCTGTAACCACAGCGAAAGATGGAAAGGCTGCAACTTACAGCGAGACACTCTCTAGTGGATCACAGCCTGCTGAACTGAAATTCCAGACTGCAAATCTATCTTCCACGAGCAGGGTAGATGATACCAACAACATTATGGTCAATACCAACAGTGTTGAAACTGCTGTTGTTGAAACACCCTCTAGTGCTTCTATTAAAGAAGGTAGCTCAAAAGAGCAGCAGAATGAAAGCAATGACAACTTACAGTTTGAGAAGAAGACAATGTCTGTGATGAGGGGTGGTGAAATGGTGCAGGTAAGCTACAAGGTTTACATCCCAAACAGATCTCCTGCTTTGGCTAGGAGGCAACTTAAGCGGTGA 1248 39.42 MARTRKHSKKKKVSSEGYRQKKSRRNKSKKLRHHHDSFSSPSDDESTSEGEYERKRARSRSRNETKKRNRTSESPPVKKRKRSKKIKKKKKKKNYITSASSDSGSCSTCKDEDSSSDEMASHGENKKDHRDSTKARIGNMRTYISPTTSCYESIQKVVTMENNPMRLKSVITVANLENEDMKNNGLKEETVYDYDDYPSSQTNDSFNTSPDKKSVVKEVNSGSNLDDDIKEKESNVSGNIGSEADNLELILRQKALENLSRFRGGIKVKPLVSVDETVSMSQPVINRSRFTWRRDPSVTTAKDGKAATYSETLSSGSQPAELKFQTANLSSTSRVDDTNNIMVNTNSVETAVVETPSSASIKEGSSKEQQNESNDNLQFEKKTMSVMRGGEMVQVSYKVYIPNRSPALARRQLKR 415
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00014 415 MobiDBLite consensus disorder prediction 73 94 - -
Smso29g00014 415 PANTHER TRANSCRIPTIONAL REGULATOR ATRX-LIKE PROTEIN 6 294 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 1 34 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 195 221 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 35 59 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 111 136 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 355 377 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 1 140 - -
Smso29g00014 415 MobiDBLite consensus disorder prediction 194 237 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00014 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr29:131463 Smso7g00010 Smso-Chr7:84973 wgd