Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00090	ATGAGGGAAGAAGGAATCAGCTCGTCGGGGGACCCGTTACTTTTCCCCAATTCACCTCCGGCCACCGCTGCTGCCAGCTCTGCTGGAGCATCATCACCTGTTGTTGCCACCAATGCTGGCAGTACGGACTGGTTGGGTCATGGTCAGGGTTCTAAAACTGGTTCACTGTCTCGAATTAGTTCACAGCCCATGTGGATTTCATTGAGTACAAGTGCGGGTGGTTCAGCTCTTGGTTCATCCAAACCTTCATGTAGACCATGGGAAAGGGGTGATCTTCTAAGACGATTGTCCACATTCAGCCCTGCAAATTGGTTTGGAAAACCTAAGGCTGCTAGTTCACTTTCCTGTTCTAGGAGAGGTTGGGTGAATATAGATGTTGATAAGATTCAGTGCGAGTCTTGTGGGAAAAACTTGAAATATAATGCACAAGATTCATGGGCCTGTACAGAAGGTGAAAATGGTGAAGAGTTTGCTAGCCAGCTGGATGAAGGACATAATGCCACCTGTCCTTGGAGAGGAAACAGCTGTGCTGAAAGTTTGGTTCAATTCCCTCCTACCCCACCATCTGCTCTGATTGGTGGTTACAAGGACCGTTGTGATGGACTAATTCAGTTTCCTTATCTACCTGTTGTGGCTAATTCTGCTCTTGATCAGATGAAGCTTTCTAGAGGTCTAGAAATTGACCGATTGCTGGTTCAGTCACCTGCGTATCCGGCAGACATTACGTCTGATTCAGAAATAAACATATATTTACATGCCCAGAAGTTGATTAGCCTATGTGGATGGGAGCCTAGGTGGCTTCCAAATGTTCAAGATTGTGAAGAGCATTCTGCCCAATCAGCTAGAAACGGTGGTTCATTTAGTCCTATTAAAGATCATGACGCGTTACAAGACCGAAGCCTGAATAAGAAACCTCTCTCTAATTCAACCAAAAAAGGTTCTCGGGGCAGGTCAAAATTCGAATCTGGATCGCTGTTGTTGGATTGTAGCTTATGTGGCGCCACAGTGAGGATCTTGGACTTTGTTCGTGTCAATCTTCCTGCTCGTTTTGCTCCTAACGACATTGATGTTCCTGAAACGAGTAAAAAGATGGCAATTACTCGTGGGGTAAGTGCTGCTAGTGCCATTAGCAGGTGGGTGGCTGCTGACGGGGCGGATGAAGAGCAAACAGAGGACGTCGATGAAGCTGCAATGTCAAATGTCAGGATGGATTTAAATCTTACAATGGGAAGTGGGTTTTCTACAGGACATGGGCGTAAAAGACCGATATCTGAATTATATCAAGATGGGAATTTAGGTCGGGATCTAGTCATCGGGCAGCCAGCTGGCAGTGAAGTTGGTGATCGTGCAGCATCATTTGAGTCCCGAGGTCCTACTACTTTCAAAAGGAATTTTGACGAAGGTGGGTCCACTGTTGATAGACCACAAGGGTTGATTCGCCAGGCAGACAGTGTTGAGGGTGTTGTCATTGACCGTGATGGTGATGAAATCAATGACAGCAAGACGTCCCCCGGCCCATCTAAACGAGCCTGTGAGTCTTCATCTGGTGCAGGTCCTAGTCAGACTTTGTATTTTGATATTGGCCATGCTGGTCCTTCAAGCCAAGGCTATGAACATGCAACACGGGCTTCTTCTGTTATTGCAATGGATACAGTTTATCATAGTGAAGATAATGATTCTATGGAAAGCGTCGAAAATCATCCTGGTTTTATCGACGAGGTCAATTACCCGTCCACGTCAGCGATCAACCCTGACCCGAATGAAACTTCAGACATGAACCATAGCATCCAGGCTCAACAAAGCACATGCCCTCCTGCTGTTTGGGTCAGCAGTGATATAGGTGTTAGCAGCACCAATGATGAAGAAGTATTGAATACCGAAACCGCTATGGTTTACAGGCGGGATGGCCCTAGCTTGGCGGTTAGTGGCGGTAGCGTTGGAATGGGTGCGAGTCATGAAGCTGAGATTCATGGTTTGATTCATAGGACAGAAAGTGTTGTTGGTGACATGGAACCAGTTACTGGTGTGACTGAGAATCAAGGTCAAACCGGTGAATTTGTTCCTGAAGAAATGCAACAAGAATATTCCGGAAGGGGGGATAGTGGGTCGAAGGTTGTTGGTTCGGTCAAAGGTGAATCTGTTGAGAGTGCTGAGAAGACTAGTGATTTGAATCTTTTACCACATGAACAAAACTCACACCCTTCTCTTTCTTGCAATGCGGTTGTATATTCGGGCCTTGAAGTATCAAAAGATGAAGTGATGCAGACCCTCAAGTCATCTCCTAATGAAGAATGTGGGTACCCAAGTTATCCCCCTGCAACTGGATTAGGGCCTCCAAATGGAGAAAGCAAATTTGAAGAACCTGTTGAGTTTGATCCAATTAAGCATCATAATTTTTTCTGCCCTTGGGTTAATGGTAATGTTGCTGCAGCCGGGGTTATTAATAGTAATAATGGTGCTAGTTCAAGTTCTAGTGCTTTAGCTCTTTGTGGCTGGCAGCTAACTTTAGATGCTTTAGATGGCTTTCAAGGGCCTGAACAAAATCAAACCCTTGAATCGGAATCAGCTGCATCGCTGTACAAGGATGATCATCAAGGTTCTGGTAAAAGACTCGTGGCACGCCATTCCTTCAACAGAAGCCGTGGCCAAAATTGA	2655	45.84	MREEGISSSGDPLLFPNSPPATAAASSAGASSPVVATNAGSTDWLGHGQGSKTGSLSRISSQPMWISLSTSAGGSALGSSKPSCRPWERGDLLRRLSTFSPANWFGKPKAASSLSCSRRGWVNIDVDKIQCESCGKNLKYNAQDSWACTEGENGEEFASQLDEGHNATCPWRGNSCAESLVQFPPTPPSALIGGYKDRCDGLIQFPYLPVVANSALDQMKLSRGLEIDRLLVQSPAYPADITSDSEINIYLHAQKLISLCGWEPRWLPNVQDCEEHSAQSARNGGSFSPIKDHDALQDRSLNKKPLSNSTKKGSRGRSKFESGSLLLDCSLCGATVRILDFVRVNLPARFAPNDIDVPETSKKMAITRGVSAASAISRWVAADGADEEQTEDVDEAAMSNVRMDLNLTMGSGFSTGHGRKRPISELYQDGNLGRDLVIGQPAGSEVGDRAASFESRGPTTFKRNFDEGGSTVDRPQGLIRQADSVEGVVIDRDGDEINDSKTSPGPSKRACESSSGAGPSQTLYFDIGHAGPSSQGYEHATRASSVIAMDTVYHSEDNDSMESVENHPGFIDEVNYPSTSAINPDPNETSDMNHSIQAQQSTCPPAVWVSSDIGVSSTNDEEVLNTETAMVYRRDGPSLAVSGGSVGMGASHEAEIHGLIHRTESVVGDMEPVTGVTENQGQTGEFVPEEMQQEYSGRGDSGSKVVGSVKGESVESAEKTSDLNLLPHEQNSHPSLSCNAVVYSGLEVSKDEVMQTLKSSPNEECGYPSYPPATGLGPPNGESKFEEPVEFDPIKHHNFFCPWVNGNVAAAGVINSNNGASSSSSALALCGWQLTLDALDGFQGPEQNQTLESESAASLYKDDHQGSGKRLVARHSFNRSRGQN	884

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	443	475	-	-
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	278	320	-	-
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	500	520	-	-
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	848	884	-	-
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	11	57	-	-
	Smso29g00090	884	Pfam	C3HC zinc finger-like	86	206	IPR012935	GO:0008270(InterPro)
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	491	520	-	-
	Smso29g00090	884	PANTHER	NUCLEAR-INTERACTING PARTNER OF ALK	1	882	-	GO:0005634(PANTHER)
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	1	57	-	-
	Smso29g00090	884	MobiDBLite	consensus disorder prediction	693	717	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00090	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	148163	Smso18g01567	Smso29g00090
	153424	Smso29g00090	Smso9g00686

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:90979443	Smso29g00090	Smso-Chr29:1794357	wgd
	Smso	Smso-Chr18:73644103	Smso29g00090	Smso-Chr29:1794357	wgd
	Smso	Smso-Chr25:15992155	Smso29g00090	Smso-Chr29:1794357	wgd
	Smso	Smso-Chr29:1794357	Smso7g00083	Smso-Chr7:1708038	wgd
	Smso	Smso-Chr29:1794357	Smso9g00686	Smso-Chr9:15982328	wgd