AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00128 ATGCACAAAACGGCGCAAGCGTGGTTCACCGGCGGTCCGAGCCAGAAGAACAGCGATCTGACAAAGCAACCTCCGTCACTTCTTGCTGATTGGAACGCTTACGCCGCATCTTCACAATCTGATCAAGATCTAGATTCTTCCGGTCTAGGTTTCGATCTCGAAGCCGCAGTTCGATCAGCCAACGATAAGGTCTCCGGCACGTTTAACGTAGTTTCAAAGGGAGTGAGGGATTTACCTGGAAATTTGCAATCTGCGACAAGCAATGTCCCAACTGGAAAATCTCTTATGACATTTGGTATGCTTCTTGCTGTTGGTGTGTTCCTTGTGTTCATTGCTGTCACCGTGTTTCTACCAGTCATGGTGCTTGTACCTCAGAAGTTTGCTATATGTTTCACTATTGGTTGTGCCCTCATAATCGCTTCATTTTTTGCTCTCAAAGGATATAGAACTCAGTTTGCACATATGACATCTAAAGAGAGACTCCCTATTACATTGGGCTTTATTGGCAGCATGGTGGGCACCATTTATGTTTCAATGGTGCTTCACAGTTATGTTCTGTCTGTATTCTTTTCTTTGTTACAGGTCATCTCATTGTCATACTATGCAATTTCCTACTTTCCCGGAGGATCGGCTGGCGTGAAATTCTTCATCTCTGCTATTACTTCTTCAATTTTGAGATGCTTTGGGAGGTGA 693 44.3 MHKTAQAWFTGGPSQKNSDLTKQPPSLLADWNAYAASSQSDQDLDSSGLGFDLEAAVRSANDKVSGTFNVVSKGVRDLPGNLQSATSNVPTGKSLMTFGMLLAVGVFLVFIAVTVFLPVMVLVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMVGTIYVSMVLHSYVLSVFFSLLQVISLSYYAISYFPGGSAGVKFFISAITSSILRCFGR 230
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00128 230 PANTHER UNCHARACTERIZED 1 219 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Smso29g00128 230 MobiDBLite consensus disorder prediction 8 22 - -
Smso29g00128 230 Pfam Got1-Sft2-like family 95 207 IPR007305 GO:0016192(InterPro)
Smso29g00128 230 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00128 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
143013 Smso10g03371 Smso29g00128
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr10:84237201 Smso29g00128 Smso-Chr29:2177739 dispersed
Smso Smso-Chr29:2177739 Smso16g02044 Smso-Chr16:84379254 transposed