Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00133	ATGAGCGGAGCTAGGGTTTCCATCCCGAACAATGTGCGGAACACGATCCAGAACATCAAGGAGATCACAGGTCATCACAGTGAAGATGAGATATACGCAATGCTTCGAGATTGTTCCATGGATCCAAACGAGACTGCTCAAAAGCTCCTATTGCAAGATCCATTTCATGAAGTTAAGAGGAAGCGTGGCCGCAAAAAAGAGAATCTGAGCAAAGAACCTACAGAGCCCAAATGGAAACCTGGGATGCAAGGGAGGGGGAATAGGGGTGGCAGGTTGAACTACTCATCTCGTCGCAATTCTAATGATGTAGGTGGTAGCAGGACATCACTTGCTGCAAAGGAAAATGGAATGAGTAAAGGTGCAGATGATAGTCCAATTCAGTCAATGCCTCAGGGTCAGAAGAATAAACAGACATTTGTGGCTAAAAGCACTCCCCGTGCTGTTCATGATGATATTGATGAGAAGAAATCTGAAGTGGTTCCCGCAGTTGAGGCAAGTAAGGGCTCCACTGTTGGTGAGAGTGTATGTGGGCCCCTCATCTCGAGTACCAATGACACATCAGCTTCTAAGACACCAGCACCTTCACCAGGGTTATATTTATCTGATAAAGATCCTGTTCTGATGCCTTCACAAGATTCCCATTTCCCTGTGGGTACAATCAGACGTGAAGTTGGGAGTCAACAAACTCCGGTTGACCAAGTTCACGAGACACCCCTTGAGACTGAATCAACACCTCTTGAGACTGAATCAACTGCGTCTGGTTCCGAGGTTGGAAACTCTTCCATGCAAGGGAAGGCACCATCGTCTCATGTCCCACTTTTCGTTTCTAGACCTTCTTCAAACTATAATAATAGGCTGCAACAAGCAACTGGGCCTCAAAAAGTTGGTCCAAGTATGGAATGGAAACCCAAACCAACAAATCAAATTCTTGCGCAAGTGACCGGGTCAACTGAGCCGATTAAGGGGCCTGTGGTTCAAGTTGAAAGTCAAACTCCAAACCCGTTTGCAGCCCGTAATTTTGATTCAAAGGATGCAACCCACGGGCTGGAGAAGAAGCTAGAGGAGGCACACATTTCAGATGATCAACATGTCATTATTCCAAACCACCTTCATGTTCCCGAAGCTGAAAAACTCGGGTTCTACTTCGGGAGTTTTGATGCCAGTTTTAATTTTAATGCAACGTCCTCAAACGGGCCTGAGCCTAGGCCCGTGAGTGACAAGAGTTCTGAGGTTTCTGAGGTGGTTGATGAAAGTATGGACGAGCAGCCCAGAAATCAAATTAGTGCTTTGGCAAGTGCTGATGATGAAGATCATCCTGACCATCCATCTTCATCATCTAATAACATACCCGAGAATCTACCAGCTGAAGGTGACGTGTTATCAAATTCGGGCTTCAACTACCATGAATCCAAACAAGAGACTTCACTCCCAACAGCAAGTCATCAATACCCTATTCTACACACCTCACCTAACTTCAATTTTGGCTTCATTCCACCAATGATTGGGACCCATCTCACATCTTTTGAAACCAACGAGTCTCATAATCATGATGGTTCGCAAGTCCCAAACTTTGTGGTTCAGCAACCATTTGACCCAGCAAGCTATTATGCTCAGTTTTATCGTCCAGGTGCTGACATGGATGGCCGCGTGTCACCCTTTCATTCACCTGGAGTTCCGACCAAGTTTAATGGAAATATTCCTGTGTTATCTCCACAAGCTGCTCATTCTTCTCAAGAGGTTGGGAACTCGCTAATGTTATCTGGTGCTGGTCCAACACCAATAGCTACCACACAAACTGGTGGATTTATGCAAACCTCCATAGCCGTGACTCAGCAACCATTACCTGTTTTCAGGCAACCAACCGGGGTTCATTTACCACATTACCCTCCAAATTATATCCCATACGGTCCATATTTCTCCCCATTTTATGTTCCTCCAATTCATCAATTTTTGAGTAATAATACCTTCCCGCAACAACCTCAAGCTGGTAGCATGTACCCGGCCCCACCAGTGGCTAGCCCTAAATACCCACTTCCACAATACAAAACGGGTAGTAATACAGGGAACCCGGTTAATATCGGAATGCCCGGAAGCTATGGACCGTATGGCTTAAACCCAGCTGGCTATAATTCTGGTTCAGCCGCTACAGCTGGCAACTCAACCTCCGATGATGACCTTGGTGGGTCCCAGTTTAAGGAAAGTAATGTCTACATTACCGGACAACAGAGTGAAGGTTCAGGTGTATGGATGACTGCACCTGGTCGAGACATGTCGGGTTTGCAGGCTAATTCTTTCTACAACATCCCTCAAGGCGGTCAAGTTGCATATACACCAACACAAGCTAGCCATGGGACTTTTGCTAGTATTTATCACCACCCGGCTCAACCAGCAACCACCAGTGCGGTTCACCCACTTCTCCAACAGTCTCAAACACTAGCCGGACCTGGTGTGGACATGGTGGGACCCACACCTCAAATCAACTGGCCTAATAACTACTGA	2499	46.42	MSGARVSIPNNVRNTIQNIKEITGHHSEDEIYAMLRDCSMDPNETAQKLLLQDPFHEVKRKRGRKKENLSKEPTEPKWKPGMQGRGNRGGRLNYSSRRNSNDVGGSRTSLAAKENGMSKGADDSPIQSMPQGQKNKQTFVAKSTPRAVHDDIDEKKSEVVPAVEASKGSTVGESVCGPLISSTNDTSASKTPAPSPGLYLSDKDPVLMPSQDSHFPVGTIRREVGSQQTPVDQVHETPLETESTPLETESTASGSEVGNSSMQGKAPSSHVPLFVSRPSSNYNNRLQQATGPQKVGPSMEWKPKPTNQILAQVTGSTEPIKGPVVQVESQTPNPFAARNFDSKDATHGLEKKLEEAHISDDQHVIIPNHLHVPEAEKLGFYFGSFDASFNFNATSSNGPEPRPVSDKSSEVSEVVDESMDEQPRNQISALASADDEDHPDHPSSSSNNIPENLPAEGDVLSNSGFNYHESKQETSLPTASHQYPILHTSPNFNFGFIPPMIGTHLTSFETNESHNHDGSQVPNFVVQQPFDPASYYAQFYRPGADMDGRVSPFHSPGVPTKFNGNIPVLSPQAAHSSQEVGNSLMLSGAGPTPIATTQTGGFMQTSIAVTQQPLPVFRQPTGVHLPHYPPNYIPYGPYFSPFYVPPIHQFLSNNTFPQQPQAGSMYPAPPVASPKYPLPQYKTGSNTGNPVNIGMPGSYGPYGLNPAGYNSGSAATAGNSTSDDDLGGSQFKESNVYITGQQSEGSGVWMTAPGRDMSGLQANSFYNIPQGGQVAYTPTQASHGTFASIYHHPAQPATTSAVHPLLQQSQTLAGPGVDMVGPTPQINWPNNY	832

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	393	478	-	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	463	478	-	-
	Smso29g00133	832	Pfam	GBF-interacting protein 1 N-terminal	8	67	IPR009719	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	146	161	-	-
	Smso29g00133	832	PANTHER	FLOCCULATION PROTEIN (DUF1296)	1	832	IPR044277	GO:0051082(PANTHER)
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	89	113	-	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	53	300	-	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	222	294	-	-
	Smso29g00133	832	SUPERFAMILY	UBA-like	8	69	IPR009060	GO:0005515(InterPro)
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	175	194	-	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	406	420	-	-
	Smso29g00133	832	MobiDBLite	consensus disorder prediction	121	142	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00133	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	148155	Smso18g01554	Smso29g00133
	153425	Smso29g00133	Smso9g00693
	424927	Smso13g00157	Smso29g00133
	431851	Smso26g01866	Smso29g00133

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr14:89966068	Smso29g00133	Smso-Chr29:2225678	dispersed
	Smso	Smso-Chr26:35949788	Smso29g00133	Smso-Chr29:2225678	dispersed
	Smso	Smso-Chr29:2225678	Smso4g02462	Smso-Chr4:42986536	dispersed
	Smso	Smso-Chr13:8778225	Smso29g00133	Smso-Chr29:2225678	wgd
	Smso	Smso-Chr18:73481993	Smso29g00133	Smso-Chr29:2225678	wgd
	Smso	Smso-Chr26:35939116	Smso29g00133	Smso-Chr29:2225678	wgd
	Smso	Smso-Chr29:2225678	Smso7g00099	Smso-Chr7:1865285	wgd
	Smso	Smso-Chr29:2225678	Smso9g00693	Smso-Chr9:16202957	wgd