Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00136	ATGGCGGAAGATTCCATAATCCTCCACACCACACTAATGCCAACACTATACCAAACCTCATTTCTCAGACAACGTTCCGCTCAAACGATCTCCCTACGAAGAACCTCACCGGCGATCGTTCGCTGCACGATCTCCACCAGCAGCAGCGATACAGCCAAGGCTACCGGAGCTCCTCGGCCGATACCGTGGGGCTGCGAAATAGATTCCGTGGAGAACGCCGCTGCGTTGCAGAATTGGTTGACGGATTCCGGTTTGCCGCCGCAGAAAATGGACATACGGAAGGTTGATGTTGGAGAGAGAGGTCTCGTTGCCAGTAATAACATCAGGAAGGGGGAGAAATTGCTGTTTGTACCTCCGTCGCTCGTTATTTCCGCCGATTCGGAGTGGAGTTTTCCAGAAGCTGGGGAGGTTTTGAAGAGATATAATGTACCGGATTGGCCGTTAATTGCAACCTACCTAATTAGTGAAGCAAGTCTTATGAAATCATCTAGATGGAGCAATTATATATCAGCCTTACCAAGACAGCCGTACTCACTTTTATACTGGACGCGTGCAGAATTAGATAGATACTTGGAAGCATCCCAGATTAGGGAACGGGCAATTGAAAGGATCAATAATGTAACCGGAACATACAATGACTTGAGAGCAAGAATTTTCTCCAAGCATCCTAATTTGTTTCCTGAAGAGGTATTCAATATGGAGACATTTAGATGGTCATTTGGCATTCTTTTTTCGCGTTTGGTTCGATTACCCTCATTGGATGGAAGGGTTGCCTTAGTCCCTTGGGCAGATATGCTGAATCACAGCTGTGATGTGGAAACTTTTTTAGACTTTGATAAATCGACAAAAGGAGTTGTATTTACAACCGATCGCCCTTACCAGCCAGGTGAGCAGGTGTTTATTTCATATGGCAGGAAGTCTAATGGAGAACTCTTGCTTTCTTACGGGTTTGTTCCAAGGCAAGGAACAAATCCACGTGATTCAGTTGAGTTGCCATTGATGATTAAAAAATCAGATAAATGTTATGAGCAGAAGGTGGAAGCTTTGAAGAAGCACGGTCTGTCAGCATCACAATGTTTTCCTTTGCAAGTCACCGGTTGGCCATTGGAGCTAATAGCATATGCATATCTAGCTGTCAGTCCCCCTAGTATGAGTGGAAAGCTTGGAGAGATGGCTTCCACAGCATCAAATAAAAGCACCAGCAATAAGGAAATCAGATATCCTGAATTAGAGGAACAGGCATTACAATTTATCTTGGATAGCTGTGAATCCAGCATATCAAAGTATACCAAGTTCCTTCAGGCAAGCGGGTCAATGGATTTGGATATAACATCTCCGAAGCAGCTGAATCGTAAAGTATTCCTTAAACAGTTAGCTGTGGACTTGTGCAATAGTGAACAGCGCATTCTCTTTCGTGCTCAATACATATTGAGGAGAAAATTAAGGGATATGAGGAGAGGTGAACTGAAGGCCCTAAGATTGTTTGATAATGTCACAAAGTTCTTCAAATAA	1512	43.98	MAEDSIILHTTLMPTLYQTSFLRQRSAQTISLRRTSPAIVRCTISTSSSDTAKATGAPRPIPWGCEIDSVENAAALQNWLTDSGLPPQKMDIRKVDVGERGLVASNNIRKGEKLLFVPPSLVISADSEWSFPEAGEVLKRYNVPDWPLIATYLISEASLMKSSRWSNYISALPRQPYSLLYWTRAELDRYLEASQIRERAIERINNVTGTYNDLRARIFSKHPNLFPEEVFNMETFRWSFGILFSRLVRLPSLDGRVALVPWADMLNHSCDVETFLDFDKSTKGVVFTTDRPYQPGEQVFISYGRKSNGELLLSYGFVPRQGTNPRDSVELPLMIKKSDKCYEQKVEALKKHGLSASQCFPLQVTGWPLELIAYAYLAVSPPSMSGKLGEMASTASNKSTSNKEIRYPELEEQALQFILDSCESSISKYTKFLQASGSMDLDITSPKQLNRKVFLKQLAVDLCNSEQRILFRAQYILRRKLRDMRRGELKALRLFDNVTKFFK	503

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00136	503	PANTHER	UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE	74	478	IPR050600	GO:0016279(PANTHER)\|GO:0018026(PANTHER)
	Smso29g00136	503	PIRSF	RMT-SET	2	500	IPR011192	GO:0009507(InterPro)\|GO:0030785(InterPro)
	Smso29g00136	503	CDD	SET-RBCMT	87	318	IPR044431	GO:0016279(InterPro)\|GO:0018022(InterPro)
	Smso29g00136	503	Pfam	Rubisco LSMT substrate-binding	337	470	IPR015353	-
	Smso29g00136	503	FunFam	Ribulose-1,5 bisphosphate carboxylase-oxygenase large subunit N-methyltransferase, chloroplastic	57	317	-	-
	Smso29g00136	503	SMART	set-7	88	310	IPR001214	GO:0005515(InterPro)
	Smso29g00136	503	Gene3D	-	322	493	IPR036464	-
	Smso29g00136	503	SUPERFAMILY	SET domain	72	320	IPR046341	-
	Smso29g00136	503	Coils	Coil	197	217	-	-
	Smso29g00136	503	SUPERFAMILY	RuBisCo LSMT C-terminal, substrate-binding domain	334	502	IPR036464	-
	Smso29g00136	503	Gene3D	set domain protein methyltransferase, domain 1	70	318	-	-
	Smso29g00136	503	Pfam	SET domain	100	304	IPR001214	GO:0005515(InterPro)
	Smso29g00136	503	FunFam	Rubisco methyltransferase family protein	323	486	-	-
	Smso29g00136	503	ProSiteProfiles	SET domain profile.	88	304	IPR001214	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00136	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	431853	Smso26g01870	Smso29g00136

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr12:16201478	Smso29g00136	Smso-Chr29:2254923	dispersed
	Smso	Smso-Chr26:36182565	Smso29g00136	Smso-Chr29:2254923	wgd
	Smso	Smso-Chr29:2254923	Smso7g00106	Smso-Chr7:1907058	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Smso	SET	1.1e-16	No_clan		TR	SET