Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00156 | ATGTTGCTATCCCCGGGCCACTCCCCCCGCCGTCTCTCATCTCCGTCGCCATCGCCGTCGGTCTCTGAAACACCTGGTGTTCACCAAACCCCTGGATCCTCCAATTCCTTAATCGCATCAACCCCCCAAAACCCTAGAAAACGAAATTCGTCAACCGTCCTCGATGAGGACACGTACGTTGCCGCAATCGAGAAGATTATCCAACGAGACTTCTTCCCTGACATCCCTAAGCTCCGAGACCGACTCGACTGGCTGGAAGCCACCCGCTCCGGCGATCCGATGCTAATCCGTGATGCGCAGTTGAAGATCATCGAACGGCGATCTGGAAAAGCTTCTGTTACCGATACGGAAGGTAAAATTCGCACGCCTGGTTCTACTTTTTTTAGAAACACTACACCGTTGGAGCTCGATAGAACTCCCGGTACCGATAGGTTTGCGAAAGAGGAGTTATTTAATGCGGTTAAGGAATCGATTAAGAACGATGACGACGGGGCTGTGGATACGAATTCGTTGTCACTTGATGAGTTTTTTAGGAAGTATACTAGCGAAGATAATGCTAGTTTTTCGAAACTTATTGAGAAAGTTAATAAAAACAAGAGGTTAAGGTATGAGTTCTTGTTAGAAGGTGAGAATCGTGATAAGGGATTGATAGAAGGTTCGAAAATGGATAGGATTACGGACGGTTATGGGACGTCTGATCAGCCTTTAGCTACGTTAGACAGTTGGAAATATACTGCGAAGAATTTGTTAATGTATCATCCGGCTGATCGAGGTGAAGCACCGTTAACTCAGGAAGAGCGGGATAATCGGTTGAAACAGATGATGAAGGAAATTAGTAAAACGAACACGCGCTTTCATGGGAAGATGGTGGATTATAGCTCTAAAGAAGATGATGAAGTGGCTGTTCTTTACAATCCTGTTGCTGGTGGTACACCGGTTCCATGGTCAATGTCGGATAGAGATGGGGATAAGATGAAGAAGTATGATTTAGAGGATTTAAGAAAGAGCCCGAATCTGTTTTATGTTGAATCTAGTAAGAAAGCGGATAACGGGTACAGCTTTGTTAAAACTCCATCTCCTGCGCCTGGTGTGGATGAATCACCCTTCATTACATGGGGAGAGATTGAAGGCACCCCGTTGAGATTGGAACCCGAAGACACCCCAGTTGACATTGGTGGCAGTGGAAACGGGCCTCAGTTCAATATCCCTCTTCCGCCTTCAAGAGATGTGAAGGCTCATTCTTTATCTCGAGAAGCTGCCAGGAAAATTAGGGACCGTTCTAGAATGTTTCAGAAACCGCCACTGCCGTCTGGTGGTGCTAGTCCTGGTGGCCGGATACTTTCCCCTGCTGCACAAAAGTTTGTCAGAAATGCGATTGCTAAGTCTTCTCAGTCTGCTAGTGTTGATGAATCGCTTCGGGCTAGTTATCGCGGGTCGAGTCCTGGGTTCTCTACACCAAAATCTGGAAGAAGTGCATCCAAGTTGGGGAGAGATGGTAGCTTGAGTTCAACAAGATCACCTTCTGTTAGGGATGGCTCTAATCCTCCTTGGTAA | 1554 | 46.78 | MLLSPGHSPRRLSSPSPSPSVSETPGVHQTPGSSNSLIASTPQNPRKRNSSTVLDEDTYVAAIEKIIQRDFFPDIPKLRDRLDWLEATRSGDPMLIRDAQLKIIERRSGKASVTDTEGKIRTPGSTFFRNTTPLELDRTPGTDRFAKEELFNAVKESIKNDDDGAVDTNSLSLDEFFRKYTSEDNASFSKLIEKVNKNKRLRYEFLLEGENRDKGLIEGSKMDRITDGYGTSDQPLATLDSWKYTAKNLLMYHPADRGEAPLTQEERDNRLKQMMKEISKTNTRFHGKMVDYSSKEDDEVAVLYNPVAGGTPVPWSMSDRDGDKMKKYDLEDLRKSPNLFYVESSKKADNGYSFVKTPSPAPGVDESPFITWGEIEGTPLRLEPEDTPVDIGGSGNGPQFNIPLPPSRDVKAHSLSREAARKIRDRSRMFQKPPLPSGGASPGGRILSPAAQKFVRNAIAKSSQSASVDESLRASYRGSSPGFSTPKSGRSASKLGRDGSLSSTRSPSVRDGSNPPW | 517 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00156 | 517 | MobiDBLite | consensus disorder prediction | 392 | 517 | - | - | |
| Smso29g00156 | 517 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
| Smso29g00156 | 517 | Pfam | Nuclear protein Es2 | 51 | 454 | IPR019148 | - | |
| Smso29g00156 | 517 | MobiDBLite | consensus disorder prediction | 411 | 429 | - | - | |
| Smso29g00156 | 517 | PANTHER | ES-2 PROTEIN - RELATED | 11 | 501 | IPR019148 | GO:0071013(PANTHER) | |
| Smso29g00156 | 517 | MobiDBLite | consensus disorder prediction | 9 | 49 | - | - | |
| Smso29g00156 | 517 | MobiDBLite | consensus disorder prediction | 457 | 511 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00156 | K13118 | protein DGCR14 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 424919 | Smso13g00136 | Smso29g00156 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr19:23957782 | Smso29g00156 | Smso-Chr29:2464617 | dispersed | |
| Smso | Smso-Chr26:36536040 | Smso29g00156 | Smso-Chr29:2464617 | transposed | |
| Smso | Smso-Chr13:7567619 | Smso29g00156 | Smso-Chr29:2464617 | wgd | |
| Smso | Smso-Chr29:2464617 | Smso7g00125 | Smso-Chr7:2128471 | wgd |