Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00162 | ATGGCAATAACTATAAGCTACACGCTTGTTCTAATTTTTTATTTTCTTCCATCTCATTTTGATATATCATATGCTCTCACATGCACAGATCACAGATCCACATCAAGAAGTCTCTACACTTCTTGTAAAGATCTTCCCCATTTATCATCTCAGCTTCATTGGACCTACAACTCAACCATGGGTGTAGCCAAGATTGCGTATCGGGCCAGACAAGGTGCAGGCGGTTGGGTTGCATGGGCCATCAACCCGAACCAAATAGGTATGGTTGGGTCAGAAGCATTGGTGGCTTTTGTCAACAGTAATGGAAGTGTGACAGTATATCCGACAATGATCACTAGTTACAGCCCGTCGATGCTTCCTGCAGATCTTAGCTTTCGGGTTACAGACCTTTCGGCCGAGTTTTTGAGTAACCAGATTACCATTTATGCTACTGTGGGCCCGTTTGCGGGCGGGTCAGTTGTTAATCAAGTGTGGCAAGCTGGGAACTTGGTTTTAGATGGTGTCCCTCAAATGCATGCAGTTTCTCAACAAAATCTTCAATCAACAGGAGAGCTAGATTTCTTGTCTGGTTAG | 573 | 44.15 | MAITISYTLVLIFYFLPSHFDISYALTCTDHRSTSRSLYTSCKDLPHLSSQLHWTYNSTMGVAKIAYRARQGAGGWVAWAINPNQIGMVGSEALVAFVNSNGSVTVYPTMITSYSPSMLPADLSFRVTDLSAEFLSNQITIYATVGPFAGGSVVNQVWQAGNLVLDGVPQMHAVSQQNLQSTGELDFLSG | 190 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00162 | 190 | ProSiteProfiles | DOMON domain profile. | 48 | 161 | IPR005018 | - | |
| Smso29g00162 | 190 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 189 | - | - | |
| Smso29g00162 | 190 | CDD | DOMON-CIL1-like | 39 | 189 | IPR045265 | - | |
| Smso29g00162 | 190 | Pfam | Protein of unknown function (DUF568) | 88 | 187 | IPR045265 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00162 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:2481648 | Smso29g00166 | Smso-Chr29:2549495 | dispersed | |
| Smso | Smso-Chr29:2481648 | Smso29g00165 | Smso-Chr29:2545530 | proximal | |
| Smso | Smso-Chr16:78136059 | Smso29g00162 | Smso-Chr29:2481648 | wgd | |
| Smso | Smso-Chr18:73149025 | Smso29g00162 | Smso-Chr29:2481648 | wgd | |
| Smso | Smso-Chr29:2481648 | Smso7g00129 | Smso-Chr7:2146320 | wgd |