Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00186	ATGGATGTGCTCTTCAATTCAATCGACGTTCGTGATTTGCTATCGTCACACGATCTCGACGACTCTTCGCCGCTCTCCGCCCCCGATCTCCGCCTTCTCATCGACCGTCTTCAAGTCCGTTCACTCGACATCAAGTCCAAAGTCCACAACTACATACTCTCTCACAATCACGAGTTCTCCGCCCTGTTCTCTCGCTGCTCCGACGCCGCCGTTAACTCCGAGCAACTTTCCGATCAAGTTTCCGACCTCGTGAACCTCTTATCATCGGATCGCCAACCGATCGATGTCGAGATCAGAGAAACAGTCGAAGAGATTAGGTCGAAACGTGTTGAATCGAAGGAGAAGAAGGATACGCTAGGTTTAGTTAAAGTAGTGTTGAAATTGAGCCAGGAATTGTGTGTCGTGGAGGATGATTTGGTGGCGGGAAAGGTTGTTGAGGCGGCGGAGGTGCTTACGGACTTGAAGGTTGCTTTACGAGTGACGGAGGATCGTACGGAGGAAGGAGAACCGATTGTATTTGGTTTGTTAAGGAAGAAATGGTCAGATTGCTTCGAAGAGATACAAAAGGTGCTAGTCAAGTTCATTGAGAATGCAGTGATATATGATCAGCAATCCAACTCTGTTTATGTCAAGAACACAATGTGTATGAATGATATTCAAGGGATTGAGCTTTGTACTGTTTTGAAAGCAATGCATGTGGTTGGCATTCTAGATTATGGGCTTGCCAAAGTAGCAGATTTGATGACTAGATATGTAATAACTCCTGCAGTGCGATCTATGTCCCACAGTTTTTCTGTAGAAGAACAAAGATTAGATTCAGGAGATATAACTGAGGCAGTTTTGAGAATAACTCTCCTCTCTGGTACTCAGGTTGAGAACATGGACGCTGAAAATATTTATTCTGGAATTAACGTGGTCATCCAGTTTATTTTCAACTATATTTGCTTTCAAAATTCTTCTTGGATGCAATTATTTGGAAGATTGACATGGCCCAACATGTCAGAATTGATTATTTCAAACTTCCTTTCTAAGATTGTTCCTGACGATGCTTCCAAACTTTCTGACTTCCAAACAATAAGGCAACTCACATCTGAGTTTGAAATATCTCTTAAAGAAGTTATGTTCATATCCTCTGGCAAAGATGAAAGGTTGACCAATTTTACAGATAATGTTGAAGTCCACTTTGCAACAAGGAAGAAGGTTGAGATCTTAGCAACAGCTAGGGACCTTCTACTACATTCAGATTTTAAACTTCCAAAGGAGTACTCAAGAAAAACTGAAGATATTAAGGATGGTGGGAATGTAGACTTGCTTTTCTCATCTGAGAGGTGTGTCATATCCGAAGCGGCTTCTCAGCTATTGGAACTTGTACATCAAACACTCAAGGATGTTTGTTTGTCATCCCCAACACTTGCTTTAGAATTCTGCCATGCTGCTAGGGATGCTTTACTTCTATATGAAGCTGTTACTCCGGTCAAGCTAGAAAGACAGCTGGATGGTATCAACCAGATTGCCGTTCTAATTCATAACGATTGCCTCTTCCTATCACAAGAGATTCTTGGCCTTAAATTTGAGTATCAGTCAGATCTCCCGACTTCCATGAAGGGAGCAGTGTTTATTGATTTAGGTATAAGATACAAGCTAATGGCAGAAGAGATATTACAAAGACAAATACAGCTTGTTAAGCATAATTTAATGGAGGCCATTGATGGTGCAGATGGATTTCAAAATACGCATCAACCAAAACGATATGAATCTGCAAAGTTCAGTATCGATCAGGTGGCTTTTATCCTTGAGAAAGTTCACATAATTTGGGAGCCATTATTGCTACCCTTAACATACAAAAGAAGTATGTGCACAGTTTTGGAGGCTGTATGTTCTAAAATGACTAAAGACATACTTCTTTTAGATGATATTGCAGCAGAAGAAACATTACAGATTCAAAGGTTACTTCATATGTTGCTGGAAAACCTTTCATCTTTATTGGATTCTTTGGTTGGTATTAATCAAACAACAAAACCACAAGAAGCATCATCAGGCACTATTGATGATTTAATTCCGTCACTCCGTCAACTACGGGTATTGGCAGATATGTTGGACATGCCTCTCAAATCTATAACGGCATCTTGGGAAAGCGGTGAGCTGGCCAAGTGCGGTTACACATCATCTGAGGTGAAAGACTTTATCAGAGCAATATTTACAGATTCACCCTTAAGGAAAGAATGCTTGTGGAGAATAGAAAATATCAAGTTTTAG	2256	40.74	MDVLFNSIDVRDLLSSHDLDDSSPLSAPDLRLLIDRLQVRSLDIKSKVHNYILSHNHEFSALFSRCSDAAVNSEQLSDQVSDLVNLLSSDRQPIDVEIRETVEEIRSKRVESKEKKDTLGLVKVVLKLSQELCVVEDDLVAGKVVEAAEVLTDLKVALRVTEDRTEEGEPIVFGLLRKKWSDCFEEIQKVLVKFIENAVIYDQQSNSVYVKNTMCMNDIQGIELCTVLKAMHVVGILDYGLAKVADLMTRYVITPAVRSMSHSFSVEEQRLDSGDITEAVLRITLLSGTQVENMDAENIYSGINVVIQFIFNYICFQNSSWMQLFGRLTWPNMSELIISNFLSKIVPDDASKLSDFQTIRQLTSEFEISLKEVMFISSGKDERLTNFTDNVEVHFATRKKVEILATARDLLLHSDFKLPKEYSRKTEDIKDGGNVDLLFSSERCVISEAASQLLELVHQTLKDVCLSSPTLALEFCHAARDALLLYEAVTPVKLERQLDGINQIAVLIHNDCLFLSQEILGLKFEYQSDLPTSMKGAVFIDLGIRYKLMAEEILQRQIQLVKHNLMEAIDGADGFQNTHQPKRYESAKFSIDQVAFILEKVHIIWEPLLLPLTYKRSMCTVLEAVCSKMTKDILLLDDIAAEETLQIQRLLHMLLENLSSLLDSLVGINQTTKPQEASSGTIDDLIPSLRQLRVLADMLDMPLKSITASWESGELAKCGYTSSEVKDFIRAIFTDSPLRKECLWRIENIKF	751

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00186	751	Pfam	Centromere-kinetochore protein zw10, middle domain	176	411	IPR048344	-
	Smso29g00186	751	PANTHER	CENTROMERE-KINETOCHORE PROTEIN ZW10	4	748	-	GO:0006888(PANTHER)\|GO:0007094(PANTHER)\|GO:1990423(PANTHER)
	Smso29g00186	751	Pfam	Centromere-kinetochore protein zw10, C-terminal	439	567	IPR048343	-
	Smso29g00186	751	Pfam	ZW10 C-terminal helical domain	590	746	-	-
	Smso29g00186	751	Gene3D	-	544	750	IPR046362	-
	Smso29g00186	751	Pfam	Centromere-kinetochore Zw10 N-terminal	37	131	IPR009361	GO:0000278(InterPro)\|GO:0000775(InterPro)\|GO:0005634(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00186	K11578	protein transport protein DSL1/ZW10

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr17:35113345	Smso29g00186	Smso-Chr29:2983059	dispersed
	Smso	Smso-Chr29:2983059	Smso7g00147	Smso-Chr7:2569458	wgd