Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00198 | ATGAACGAGGTGATCACCATCGCTGATGCGGCGTACCGCATTAGCAAGGCGACGGATACGGCGGCGACACCTTCGTCTTCAGTTCAGGTCCTCCCGTACAGTGTCCCGCTGTTATCTGCATTCCTTGCCTTTGCGATTGCTCAATTCCTAAAGGTCATCACCACCTGGTATAAAGAAAAGAGATGGGATCCTAAAAAGATTGTGGGTTCTGGTGGAATGCCATCATCTCATTCTTCAACTGTTGTGGCACTAGCAGTATCCATTGGTCTACATGATGGGGTTGAATCATCATCATTTGCAATTGCTGTTGTTATGGCTTTTATTGTTATGTATGATGCATCTGGAGTCAGACTCCATGCCGGTCGCCAGGCTGAATTGTTGAACCAGATTGTCTGTGAATTTCCTCCTGAGCACCCGTTATCCACATCTAGACCTCTACGTGATTCTCTTGGGCATACTCCATTACAGGTGATTGCGGGGGCCATGTTAGGGTTCATAGTGGCATTAATGATGAAAGCATCCGAGTAG | 528 | 47.35 | MNEVITIADAAYRISKATDTAATPSSSVQVLPYSVPLLSAFLAFAIAQFLKVITTWYKEKRWDPKKIVGSGGMPSSHSSTVVALAVSIGLHDGVESSSFAIAVVMAFIVMYDASGVRLHAGRQAELLNQIVCEFPPEHPLSTSRPLRDSLGHTPLQVIAGAMLGFIVALMMKASE | 175 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00198 | 175 | CDD | PAP2-like | 37 | 169 | - | - | |
| Smso29g00198 | 175 | PANTHER | ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN | 7 | 173 | IPR003832 | - | |
| Smso29g00198 | 175 | Pfam | Divergent PAP2 family | 36 | 167 | IPR003832 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00198 | K09775 | uncharacterized protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr23:66191080 | Smso29g00198 | Smso-Chr29:3178579 | dispersed | |
| Smso | Smso-Chr26:7416151 | Smso29g00198 | Smso-Chr29:3178579 | dispersed | |
| Smso | Smso-Chr29:3178579 | Smso2g02775 | Smso-Chr2:115380356 | dispersed | |
| Smso | Smso-Chr29:3178579 | Smso7g00158 | Smso-Chr7:2813161 | wgd |