Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00218 | ATGAAATACAATGAAATCTCCCATTTTAGCCACCCTCAACACCGGCTTAAACCGGGCTACACCGAGGTCCCATTCAAGTGTGACGGGTGCAAGGAAGTCGGCATAGGGTCCAACTACAAATGCACAACATGCAACTATGATTTACATGTCCATTGCGCCCTCCTGTCCCCTTCCATCACCCACCCATTCTACACCAAGTGTTCATTCCAGTTTCTATCGCGCCCTCCTGGCCCTATACCGCGATACTGCAACGCGTGCGAGAAAGCAGTGCCAGGGTTCGTTTACCACTGCAAGTTGTGCGGGTTCGACCTTCACCCATGTTGCGCCAAGCTTCCAACTATGTTGGATGACGGTGAGGTGGAGTTGTACTTGTACCGAAAAGTAGGGTCTGCCTGCCATAAGTGTGGCAGGAAAGGACGAAGTTGGAGTTACAGGTCAAAGTGCAAGAAGTACAACCTACATGTGGCATGTGTGAAAGAGATGTTAGTGGAGAGTTGGCATGAAATATACTTTGGTAGGAGTGGGTCGAGTGGTAATTATGGTGATTTGCATGGGCAAAATGGGAAATTCGAGACAAGAATTCCAAGCTTGAAGGGTACATTGGAAAGCTATCACCATAATCATCATCATCAAAGCAAAGGGAAAGTGAAGAAATGTTGTGAGATGGCTGGTTTGGCAATGCAGTTTGTAATTTCAGCTGTTCTTGGTGATCCGACCACTCTAATTGCCAGTGTTGTTGGTGCTTTGATGTCTAAATAG | 759 | 47.04 | MKYNEISHFSHPQHRLKPGYTEVPFKCDGCKEVGIGSNYKCTTCNYDLHVHCALLSPSITHPFYTKCSFQFLSRPPGPIPRYCNACEKAVPGFVYHCKLCGFDLHPCCAKLPTMLDDGEVELYLYRKVGSACHKCGRKGRSWSYRSKCKKYNLHVACVKEMLVESWHEIYFGRSGSSGNYGDLHGQNGKFETRIPSLKGTLESYHHNHHHQSKGKVKKCCEMAGLAMQFVISAVLGDPTTLIASVVGALMSK | 252 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00218 | 252 | ProSiteProfiles | Zinc finger phorbol-ester-DAG-type profile. | 13 | 67 | IPR002219 | - | |
| Smso29g00218 | 252 | PANTHER | CYSTEINE-HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN | 2 | 250 | - | - | |
| Smso29g00218 | 252 | SUPERFAMILY | Cysteine-rich domain | 36 | 114 | IPR046349 | - | |
| Smso29g00218 | 252 | Gene3D | - | 12 | 59 | - | - | |
| Smso29g00218 | 252 | Gene3D | - | 79 | 111 | - | - | |
| Smso29g00218 | 252 | Pfam | C1 domain | 74 | 109 | IPR004146 | - | |
| Smso29g00218 | 252 | Pfam | C1 domain | 9 | 53 | IPR004146 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00218 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 143054 | Smso10g03423 | Smso29g00218 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:3498520 | Smso5g00370 | Smso-Chr5:7073588 | dispersed | |
| Smso | Smso-Chr10:89631919 | Smso29g00218 | Smso-Chr29:3498520 | wgd | |
| Smso | Smso-Chr16:76216835 | Smso29g00218 | Smso-Chr29:3498520 | wgd | |
| Smso | Smso-Chr29:3498520 | Smso7g00177 | Smso-Chr7:3121563 | wgd |