Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00220 | ATGGATGAAACGGAGAAGCCGTCGGAAGCCAAGAGAACCACCGTCGGGCCACCCTCCGTTTTGGCCTACCTCGATCCTAATTACTGGAATGAGAGGTTCAGTTCTGAGGATCATTACGAATGGCTTAAAGATTACTCTCATTTTCGTCATCTGATCCAGCACCACATCAAACCTGATTCTTCAGTATTGGAGCTTGGGTGTGGAAACTCACAACTGTGTGATGAGTTATATAAAGATGGAATTACTAATTTGACCTGCATTGATCTATCTTCGGTTGCAGTTGCGAAAATGCAAAAACGGTTGTTTTCTAAAGGCTACAAAGATGTCAAAGTATTGGAAGGCGATATGTTGAATCTTTCCTTTGCTGATGAATCGTTTGATGTTGTTATAGAGAAAGGAACCATGGATGTTTTGTTCGTGGACAGTGGTGACCCGTGGAACCCACGACCTGAGGCTGTAAACAAAGCAATGGCGATGCTTCAAGGCGTTCATAGGGTTCTAAAACCCCATGGGATTTTTATCTCAATCGCTTTTGGTCAGCCACATTTCAGGCGTCCATTATTTAATGCTCCTGAGTTTACATGGTCCATTGACTACACTACATTTGGAGATGGATTTCATTATTTCTTTTATATCTTGAGGAAGGGATGCAAACCATTAGATGCCAATGCAGATGTCAAGAAAGTTGAGACACCATCTCTATGCCTTTATCAAGATGAATTGGATGATGAAGATTATTTATTTCGTACCAACATCGATGAAATTGATGATCAAATATGA | 780 | 41.03 | MDETEKPSEAKRTTVGPPSVLAYLDPNYWNERFSSEDHYEWLKDYSHFRHLIQHHIKPDSSVLELGCGNSQLCDELYKDGITNLTCIDLSSVAVAKMQKRLFSKGYKDVKVLEGDMLNLSFADESFDVVIEKGTMDVLFVDSGDPWNPRPEAVNKAMAMLQGVHRVLKPHGIFISIAFGQPHFRRPLFNAPEFTWSIDYTTFGDGFHYFFYILRKGCKPLDANADVKKVETPSLCLYQDELDDEDYLFRTNIDEIDDQI | 259 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00220 | 259 | Pfam | Methyltransferase domain | 57 | 177 | IPR025714 | - | |
| Smso29g00220 | 259 | FunFam | EEF1A lysine methyltransferase 4 | 21 | 232 | - | - | |
| Smso29g00220 | 259 | CDD | AdoMet-MTases | 62 | 178 | - | - | |
| Smso29g00220 | 259 | Gene3D | Vaccinia Virus protein VP39 | 21 | 229 | IPR029063 | - | |
| Smso29g00220 | 259 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 27 | 210 | IPR029063 | - | |
| Smso29g00220 | 259 | PANTHER | SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN | 15 | 216 | IPR051419 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00220 | K22857 | EEF1A lysine methyltransferase 4 [EC:2.1.1.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:3551470 | Smso29g01652 | Smso-Chr29:43744522 | dispersed | |
| Smso | Smso-Chr29:3551470 | Smso7g00179 | Smso-Chr7:3145736 | wgd |