Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00230 | ATGGCTTCTTCTTCTTCTTCCGCTTGCAGCTTCATCTTCTACGCTCTATTGCTTATACAACTTTGCAGTGCTCGTGAGATAGTGGACAAGAACCAGAACAACGATCAAAAAGAAGAAAATCATATAGATATTTATGGGAAGAATGGTGTTTATGATTTGGATCCGGCTCTAAATGTGTTCTTTCATGTGAATGATTTATATTCGGGCAAGAAAATGCCAATTTATTTCGCGGTTAATGATCCTTCAACAACTCCTCGGTTGTTAACTAGAGAACAATCCGATTTGATACCATTTTCCTCAAAAAAACTCGCGTATCTTCTAGAATTGATATCATTAGTTGAGGGTTCGCCTCAAGCTCTAGCCATGGAGCAAACACTCAAACAGTGTGAGCTTGAGGCAACCCCTGGGGAGACAAGGTTTTGCGCTAGCTCGTTAGAGTCCATGCTGGACTCTACACGAGGGATATTGGGTATGGTCAAAATAAAGGCGTTGACCACCAATATCCGTAATTTGTCTAGTACCCTTTTGCAAGGGTACACCTTTTTGAAGGAGCCATTGGAGATTAATGTTTCTGATATGGTGGCTTGTCATACCATGGCCTATCCTTATGCGGTTTACTATTGTCATGGTCAAAAGGGGTATAATAGGGTTTTTGAGATATCTTTGGGTGGTGAAAATGGAAATATAGTGGATGCTATTGCTGTCTGCCACATGGACACTTCCATGTGGGATAGTGATCACGTGGCGTTTCGTGTGCTCGGAGGCCAGCCTGGCAGCTCGCCGGTGTGCCATTTTCTCCCTGCCGATAATATTGTGTGGATACCATCACCATAG | 834 | 43.05 | MASSSSSACSFIFYALLLIQLCSAREIVDKNQNNDQKEENHIDIYGKNGVYDLDPALNVFFHVNDLYSGKKMPIYFAVNDPSTTPRLLTREQSDLIPFSSKKLAYLLELISLVEGSPQALAMEQTLKQCELEATPGETRFCASSLESMLDSTRGILGMVKIKALTTNIRNLSSTLLQGYTFLKEPLEINVSDMVACHTMAYPYAVYYCHGQKGYNRVFEISLGGENGNIVDAIAVCHMDTSMWDSDHVAFRVLGGQPGSSPVCHFLPADNIVWIPSP | 277 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00230 | 277 | ProSiteProfiles | BURP domain profile. | 60 | 276 | IPR004873 | - | |
| Smso29g00230 | 277 | SMART | BURP-2 | 58 | 276 | IPR004873 | - | |
| Smso29g00230 | 277 | PANTHER | BURP DOMAIN PROTEIN USPL1-LIKE | 38 | 276 | IPR044816 | - | |
| Smso29g00230 | 277 | Pfam | BURP domain | 59 | 274 | IPR004873 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00230 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 148110 | Smso18g01431 | Smso29g00230 | |
| 153431 | Smso29g00230 | Smso9g00769 | |
| 431901 | Smso26g02063 | Smso29g00230 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr29:3622057 | Smso9g00769 | Smso-Chr9:18322230 | dispersed | |
| Smso | Smso-Chr29:3622057 | Smso29g00232 | Smso-Chr29:3677373 | proximal | |
| Smso | Smso-Chr18:71753448 | Smso29g00230 | Smso-Chr29:3622057 | wgd | |
| Smso | Smso-Chr26:47413736 | Smso29g00230 | Smso-Chr29:3622057 | wgd | |
| Smso | Smso-Chr29:3622057 | Smso7g00189 | Smso-Chr7:3235190 | wgd |