Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00239	ATGATACGAGCGGTGATAGTAATCAACGACCAAGGCAAGCCTCGCCTTGTAAAGTTCTACGACTATCAGCCGGTGGAGAAACAACAGGAAATCATACGGAACGTTTATGGAGTTCTATGCAGTAGAGCTGAGAATGTGAGCAACTTTGTTCAAGATTCAACTTTTGGGCCGGATACCCGACTTGTATACAAGACTTTTGCTACACTATTCTTCATTGTCATATTTGACGATTCTGAAAATGAACTTGCTATACTAGATCTTATGCAAGTATTCGTGGAGACGTTGGACAAGTGTTTTGGTAATGTGTGTGAGCTTGATATCGTGTTCAATTTCAACAAGGTACATACCATCCTTGATGAGATTATTTTGGGTGGTCAAGTTGTGGAAATGAGTTCTTCTGAAGTTGTCAAAGCACTAGACGACATTACTCGGCTGCAGAAGAACCCGAATTCAATCGTTCGAGTTCCAAAATCCATATCTGGTTGGCAGGGACGATAA	498	41.37	MIRAVIVINDQGKPRLVKFYDYQPVEKQQEIIRNVYGVLCSRAENVSNFVQDSTFGPDTRLVYKTFATLFFIVIFDDSENELAILDLMQVFVETLDKCFGNVCELDIVFNFNKVHTILDEIILGGQVVEMSSSEVVKALDDITRLQKNPNSIVRVPKSISGWQGR	165

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00239	165	PIRSF	AP-complex-sigma	1	154	IPR016635	GO:0015031(InterPro)
	Smso29g00239	165	Gene3D	-	1	158	-	-
	Smso29g00239	165	SUPERFAMILY	SNARE-like	1	139	IPR011012	-
	Smso29g00239	165	PANTHER	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	2	144	IPR016635	GO:0015031(InterPro)\|GO:0016192(PANTHER)\|GO:0043231(PANTHER)
	Smso29g00239	165	FunFam	AP complex subunit sigma	1	155	-	-
	Smso29g00239	165	Pfam	Clathrin adaptor complex small chain	1	143	IPR022775	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00239	K12399	AP-3 complex subunit sigma

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr29:3797292	Smso6g01668	Smso-Chr6:29063997	dispersed
	Smso	Smso-Chr29:3797292	Smso7g00199	Smso-Chr7:3390085	wgd