Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00257	ATGGGATCCGCCTGTTGTGTTGCTGCTAGAGATAGAACTATAACAGATCGATCTAGTAATGATATTATTGCAAGAAATGATCGGTATTCGCCATCATGGAGCTTTAGGTGGGATAACCGGGGGCGTGTGGCAGGTGAGGAGTCTTCCATTATTGACAGGTTCGACAGTAAATCTCATACAACTGTAGAAACTGCTTATGCAACAGAAGGCAGTCCATTGGACAGTTCTAGAAGTCTGACGTGGCAAAAGTCACCACTATCTGAAGAAATTGGGCTTCCTCAATTAGATACGTTAAGTTCCAAGAATCTTCATGAGGTGAAAGATTCAAGGGGAACCCAAACTCCTGTAGCTTTGGAACTGTCTCCAACCAAAATTTTAACCCCAACACATTCAATTTCATCCTTGTCAGCATCTCCTTTGTCTTCTTCCCAAAGTCAACTCATGCCCATGTCAAGTTTGACCCCATCAAGATGGGCCCGCCGCTCGCCAGGTCACCACCATCTACTCCGTCAAGTATCAGATAGCCGAATTCGAGGCATGATGTCACCAAATTTTTCAATATCTGAAGATGGTTCTCCTTTTATGCATCACCATGGGTTGAACAATAAGTCAAACTTTGGGTCCCACGGTGGGTCTTCAGATGGTTGGTCAAATAGGGATAGATGGTCTTTTGATAGTGAGGCTATGAGCTTTAGTCGTGATAGAATTAGCCGATCTAGTGTCAGGGTTTCTTCCTCTCCAACTGTTGAGATTATGACATGTGGCATCTGCTCCAAGCTTTTAACCGAACGGTCCTCGTGGAGCAGCCATAAAATCATGGCTACTAACGGGCTTCCCGTTGTTTCTGTTCTGATTTGTGGGCATGTTTATCATGCAGAGTGTTTGGAAAATATGACACCCGAGATTAATAAGTATGACCCAGCGTGTCCCGTTTGTACTCTGGGAGAAAAAAAGGTTATTAAGTTGTCAGGTGAAATGGATTTCAAGGGTAAAATGGGAAAGAAATTAAGTCGTCGGGTGGTGGATGGTGGCAATTCTGTTATTTTTAATCAATTTACAAGTGGAAGGGGTCCCATGATGGGGTCAAGTTCCAGCATGAAAAGCTCTACAAGCACAGGAAAACCGTTTTTAAGGAGACATTTTTCTTTTGGATACAAACCTAATAGATATTTTTCAGACAACAGTTATAGGAAAAAGAGATTTTTCTGGTCAAAATCAAGCAAGGAGTGA	1230	42.68	MGSACCVAARDRTITDRSSNDIIARNDRYSPSWSFRWDNRGRVAGEESSIIDRFDSKSHTTVETAYATEGSPLDSSRSLTWQKSPLSEEIGLPQLDTLSSKNLHEVKDSRGTQTPVALELSPTKILTPTHSISSLSASPLSSSQSQLMPMSSLTPSRWARRSPGHHHLLRQVSDSRIRGMMSPNFSISEDGSPFMHHHGLNNKSNFGSHGGSSDGWSNRDRWSFDSEAMSFSRDRISRSSVRVSSSPTVEIMTCGICSKLLTERSSWSSHKIMATNGLPVVSVLICGHVYHAECLENMTPEINKYDPACPVCTLGEKKVIKLSGEMDFKGKMGKKLSRRVVDGGNSVIFNQFTSGRGPMMGSSSSMKSSTSTGKPFLRRHFSFGYKPNRYFSDNSYRKKRFFWSKSSKE	409

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00257	409	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	234	314	IPR013083	-
	Smso29g00257	409	ProSiteProfiles	Zinc finger RING-type profile.	254	313	IPR001841	-
	Smso29g00257	409	SMART	ring-2	254	312	IPR001841	-
	Smso29g00257	409	MobiDBLite	consensus disorder prediction	133	163	-	-
	Smso29g00257	409	MobiDBLite	consensus disorder prediction	133	158	-	-
	Smso29g00257	409	PANTHER	EXPRESSED PROTEIN	1	318	-	-
	Smso29g00257	409	SUPERFAMILY	RING-U-box	249	313	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00257	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	143024	Smso10g03391	Smso29g00257
	152079	Smso24g00699	Smso29g00257

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr29:4104407	Smso5g00724	Smso-Chr5:15514310	dispersed
	Smso	Smso-Chr10:89178608	Smso29g00257	Smso-Chr29:4104407	wgd
	Smso	Smso-Chr16:76932199	Smso29g00257	Smso-Chr29:4104407	wgd
	Smso	Smso-Chr24:13411292	Smso29g00257	Smso-Chr29:4104407	wgd
	Smso	Smso-Chr29:4104407	Smso7g00218	Smso-Chr7:3826363	wgd