AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00264 ATGGCGAGCAAATCTGTGGTCATGGCTTCATCGTTGACTGGAGAAGCCTTCGAGTCGTTCGACGTTGAATTCTCCGACTCCGATTCGTGGCAGGTTATCGATCCGTCCGATTCCGATGACGGAAACTTCTCTTACGGTGACGTCATCACCGATGACGACGACGATGATGAAGACAACGACGAAGCCGTGCCGGACGTCGATGATCTTCTGCAACATCCTTATGGATCTCCGGCGTCTGATATATCTATGCAATCTCTCGTGGATGAAATCACTCATCACTGCCAGGAACTTAACGACGCGTGTGAAATTGATCACATCCGTCAGACGATCGGCGGCGGCGACGCCGTCGTGGATGACGGTGAAGATGATTCATACGATGAGGCTGAAGATGCCGATGATGATTCGGATTTGGACGACGAACTGGTGCCGAAATGGTTGAACAACAAATTCGAAAGGCAGAGGATGAAGAAATTGGGGAAACGGGCGTATCCGAAGATGAAAAAGTCCAAACGGCTGGCTTACATGTACAACAAGCCTGGATGTGTTCATGGAAAGCATGGCGTAGGAACGAAGCACAATCTCATCTGGTAA 591 49.92 MASKSVVMASSLTGEAFESFDVEFSDSDSWQVIDPSDSDDGNFSYGDVITDDDDDDEDNDEAVPDVDDLLQHPYGSPASDISMQSLVDEITHHCQELNDACEIDHIRQTIGGGDAVVDDGEDDSYDEAEDADDDSDLDDELVPKWLNNKFERQRMKKLGKRAYPKMKKSKRLAYMYNKPGCVHGKHGVGTKHNLIW 196
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00264 196 MobiDBLite consensus disorder prediction 46 64 - -
Smso29g00264 196 MobiDBLite consensus disorder prediction 112 139 - -
Smso29g00264 196 MobiDBLite consensus disorder prediction 28 71 - -
Smso29g00264 196 MobiDBLite consensus disorder prediction 116 139 - -
Smso29g00264 196 PANTHER VID27-LIKE PROTEIN 1 193 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00264 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
431882 Smso26g02011 Smso29g00264
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr13:3982805 Smso29g00264 Smso-Chr29:4248736 wgd
Smso Smso-Chr26:45049941 Smso29g00264 Smso-Chr29:4248736 wgd