AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00287 ATGGAGATACAACTCATGACACTCTCACCGGCGACCACCACCACCGCTCCCTACGCCACCGCACCTTCCACCCCTCCCCGCTTCCCCAACTTCTTCTACAGCGCACCCACCAGCCCAATCCACACCACCTTTCAAGACGCCGACGCCGACGAAGATAACGACTTCTCATTCGATTTCAGCGGACAGCTGGAACCCCCTTCCATCTCCGCCGCCGACGACCTCTTTCACGGCGGCAAAATCAAAACAGCAAACCCTTCATCTAACCATCATCCCCAACCCCCCACATCACGATGCCGAGAAGGCAAGGAGTCTTCGTTGCTAGTCCTCGTTGAGTCTTTTAGTTCATGTGCGGCCTTTATCAATCATAGCCTTCCTGTCTGTAGCCATCAAGTTTCGCGGATAGAGATTGTGTCCATCTCTGGATGA 426 54.46 MEIQLMTLSPATTTTAPYATAPSTPPRFPNFFYSAPTSPIHTTFQDADADEDNDFSFDFSGQLEPPSISAADDLFHGGKIKTANPSSNHHPQPPTSRCREGKESSLLVLVESFSSCAAFINHSLPVCSHQVSRIEIVSISG 141
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00287 141 MobiDBLite consensus disorder prediction 64 101 - -
Smso29g00287 141 PANTHER OS07G0619500 PROTEIN 19 95 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00287 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr18:71340306 Smso29g00287 Smso-Chr29:4685648 dispersed
Smso Smso-Chr29:4685648 Smso9g00788 Smso-Chr9:19509186 dispersed
Smso Smso-Chr10:89785390 Smso29g00287 Smso-Chr29:4685648 wgd
Smso Smso-Chr13:2439426 Smso29g00287 Smso-Chr29:4685648 wgd
Smso Smso-Chr16:75908215 Smso29g00287 Smso-Chr29:4685648 wgd
Smso Smso-Chr24:15877924 Smso29g00287 Smso-Chr29:4685648 wgd
Smso Smso-Chr26:47911174 Smso29g00287 Smso-Chr29:4685648 wgd