Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00297 | ATGACAAGGTTTTCAAGGGTAAAAAGCCGTGCCCGAGAAGAATTTTGGAGGAAGGACTTCAATTTTGGAGTCCTTGAACCCCTTTTCAGTACCCAATTAACCCTCGTTTTCGAATTAGGGGATAAGGGTATGTTGAGTACCGGCGGTGGAGGAACCTTTTTCTGGTTCCGAAACGACAAATCTTTATCGAAAGTCGAAGGAATCGTTGTGATTTTCAGCTGGGGTTCGCTTCAATTTAAGGATTACGTCAATCTTTATTCGTCTAGTGGCTGGAACTCTCTTGTTGTTGTTTCCGATTTGCTCAATCCATTTTTTCCAGAGAGAGCCACATCGCTTGCATTTTCTGTTCTCAATGAGCTTTTAGAGGAATTGAGGGCTAGCCCATGCCCTTTAGTCCTTGCAGCCTTCTCTGGTGGTTCACAAGCTTGTATGTATAAGGTTCTTCAGATCATTGAAAGGACATGTGAAGCACATCTTAATTTGGATGATAGTCGTTTAATCATGACATGCATCTCTGGTCAAATCTATGACTCTGGTCCGGTCAGTGTAACCAGTGATTTGGGTGCCCGGTTTGCCCTACATTCTTCCATCCTCAATGTACCCGGTTCATCAAAGTTGGTATCAATGGTTGCAAAAGGTGTCACATCTGGTCTCGATGCACTATTCCTTACTAGATTTGGATCCCACCGCTCTGAATATTGGCAAACGCTTTACTCATCTGTTGGTTTGGGCGCCCCATTTCTCATATTGTGTTCGGAAAATGACGATCTTGCCCCTTATCCCGTTATTTGCTCATTTGTTCAACAAGTACAAGGATTAGGAGGACATGTTCGACTTATTGGATGGAAGGACTCTCCTCACGTAGGTCACTACAAGCACAATCCCATCCAATACAGAGCAGCTGTAACTGAATTTCTTGACCACTCAGTTTCAATATTTAACCAGAAACTTCAAAAACTCGGTGAAAGGAACGGCATGGAGGGCATGCACGATAAAATATGTGAATTAATTTGTGACCTCCAAAATGCAGCAGTTGATTCAAACCAAAGCCTTAGACGAGTAGCAACAGGGCCAAACGACCACTTTTTCTTACCAAGTTCAGCCGAGTATCAAACAACCAAAGAATCGGGTTCATTACAAGATGAACAAAAAACAACGGTCCATTTAGGAAGCCCACCGGGCCTGAACCCACACAGTGTCCTTGGTCAAGTGCTGTTTGATGTATGTGTCCCTAAAAACATTGAAGGTTGGGATATTAAGTTTGAGAACCGAAAACCTTTTGCAGACGCAGGTAAACGGCCGTCAGCTCTAAAACGCATGAGACGATCAAGATTATGA | 1338 | 43.35 | MTRFSRVKSRAREEFWRKDFNFGVLEPLFSTQLTLVFELGDKGMLSTGGGGTFFWFRNDKSLSKVEGIVVIFSWGSLQFKDYVNLYSSSGWNSLVVVSDLLNPFFPERATSLAFSVLNELLEELRASPCPLVLAAFSGGSQACMYKVLQIIERTCEAHLNLDDSRLIMTCISGQIYDSGPVSVTSDLGARFALHSSILNVPGSSKLVSMVAKGVTSGLDALFLTRFGSHRSEYWQTLYSSVGLGAPFLILCSENDDLAPYPVICSFVQQVQGLGGHVRLIGWKDSPHVGHYKHNPIQYRAAVTEFLDHSVSIFNQKLQKLGERNGMEGMHDKICELICDLQNAAVDSNQSLRRVATGPNDHFFLPSSAEYQTTKESGSLQDEQKTTVHLGSPPGLNPHSVLGQVLFDVCVPKNIEGWDIKFENRKPFADAGKRPSALKRMRRSRL | 445 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00297 | 445 | MobiDBLite | consensus disorder prediction | 373 | 393 | - | - | |
| Smso29g00297 | 445 | Gene3D | alpha-beta hydrolase | 75 | 320 | IPR029058 | - | |
| Smso29g00297 | 445 | MobiDBLite | consensus disorder prediction | 373 | 392 | - | - | |
| Smso29g00297 | 445 | SUPERFAMILY | alpha-beta-Hydrolases | 52 | 308 | IPR029058 | - | |
| Smso29g00297 | 445 | Pfam | Eukaryotic protein of unknown function (DUF829) | 171 | 417 | IPR008547 | - | |
| Smso29g00297 | 445 | PANTHER | UNCHARACTERIZED | 49 | 314 | IPR008547 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00297 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 431920 | Smso26g02088 | Smso29g00297 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr26:48109998 | Smso29g00297 | Smso-Chr29:4832685 | dispersed | |
| Smso | Smso-Chr29:4832685 | Smso8g01512 | Smso-Chr8:28612711 | dispersed | |
| Smso | Smso-Chr17:74955803 | Smso29g00297 | Smso-Chr29:4832685 | wgd | |
| Smso | Smso-Chr26:48108133 | Smso29g00297 | Smso-Chr29:4832685 | wgd | |
| Smso | Smso-Chr29:4832685 | Smso7g00256 | Smso-Chr7:4523661 | wgd |