Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00311 | ATGAAACAACTTTTTTCACCCCATTACCGTCAGCCACCACCACCTCGTCAAAACTCCGCCACTGCACCACCACCATTGTTAGATTTGAACTCCGCCATTGCCACTGTCACCGCCCCCTCGTCATCTGTTAGAGAGCACGTGAAAATCTCCCCTAACTCTACCAACACCATATTCGATTACTTTCATGATACAATGAATGACGATCTGTTATTCGGTAAAATCAAATCTGGATGCAATGTGTTCTTCGCTATCTTCTTCGCCACAGTTATTCTGTTCGCATATGCTTCAGCGCTCAAGGAAGGACAAACGTGCGTAGATAATAGCAATTGTGACTCAGGATTACATTGTGAGGCTTGTGTTGCAGACGGCAATGTTCGCCCTCGGTGTACTCGTCTTCAGCCTCTCAGTCCGTTTTCTAAGGTGAAAGGATTGCCGTTCAATCGGTACTCGTGGTTAACGACGCATAATTCGTTCGCTAAATTTGGAGAGAAGTCGGCTACCGGTTCCGTCGTTCTAGCTCCGACGAACCAGCAGGATTCTGTTAGTTCTCAGCTCGATAATGGTGTGAGAGGGCTGATGCTTGATATGTATGACTTTGAGAATGACATTTGGTTATGTCATTCCTTTGGTGGCAAATGCTTCAACTACACAGCTTTTCAACCTGCTATCAATGTTCTGAAAGAGATTCGAATTTTCCTAGAAAAGAATCCTACTGAAATCATAACCATAATCATTGAAGATTATGTTACCTCACCAAAGGGTCTAACTAACGTCTTCAATGCTGCTGGTCTGAGGAAATACTGGTTTCCAGCAGCCCAAATGCCAAGTGATGGTAGGGACTGGCCCACAGTTGACTCAATGGTCCGCCAAAATTACCGTTTGGTAGTTTTCACTTCCAAATCTTCTAAACAGGCTACCGAAGGGATTGCATATGAGTGGAAGTACTTAGTTGAAAACCAATATGGAACAGATGGGATGAAAAGTGGTTTATGCCCTAACCGTGCTGAATCAGCAGCAATGAACACTACATCAAGATCACTGGTTTTAATGAATTATTTCCCAGATACCCCTGATATTACCGAAGCTTGCAAGCACAATTCAGACCCATTAATAAGCATGGTGAACACATGCCATGATATAGCTGGTAAACGTTGGCCTAACTTCATTGCTGTTGACTTTTACAAGAGGAGTAATGGTGGGGGTGCACCAGCTGCTGTAGATATGGCTAATGGTCAGCTGGTTTGTGGTTGTAACACCATTGCAGCATGCAGGCCAAACATGACCTTTGGAGCCTGTAACTTCCCAGAGGCTGGGGCTGCTCCAACCCCAACTTCAGCAATAAAAAGCTCCGGGAACATCGGTGGTGGACCGGGTCAACTTGGATGGTTGTTTGGGTCAGGTTTGATTGCTATATACTTGTGTTTTTAA | 1428 | 44.68 | MKQLFSPHYRQPPPPRQNSATAPPPLLDLNSAIATVTAPSSSVREHVKISPNSTNTIFDYFHDTMNDDLLFGKIKSGCNVFFAIFFATVILFAYASALKEGQTCVDNSNCDSGLHCEACVADGNVRPRCTRLQPLSPFSKVKGLPFNRYSWLTTHNSFAKFGEKSATGSVVLAPTNQQDSVSSQLDNGVRGLMLDMYDFENDIWLCHSFGGKCFNYTAFQPAINVLKEIRIFLEKNPTEIITIIIEDYVTSPKGLTNVFNAAGLRKYWFPAAQMPSDGRDWPTVDSMVRQNYRLVVFTSKSSKQATEGIAYEWKYLVENQYGTDGMKSGLCPNRAESAAMNTTSRSLVLMNYFPDTPDITEACKHNSDPLISMVNTCHDIAGKRWPNFIAVDFYKRSNGGGAPAAVDMANGQLVCGCNTIAACRPNMTFGACNFPEAGAAPTPTSAIKSSGNIGGGPGQLGWLFGSGLIAIYLCF | 475 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00311 | 475 | PANTHER | UNCHARACTERIZED | 108 | 423 | IPR051057 | GO:0008081(PANTHER) | |
| Smso29g00311 | 475 | ProSiteProfiles | Phosphatidylinositol-specific phospholipase X-box domain profile. | 145 | 253 | - | - | |
| Smso29g00311 | 475 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
| Smso29g00311 | 475 | SUPERFAMILY | PLC-like phosphodiesterases | 143 | 414 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Smso29g00311 | 475 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 136 | 401 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00311 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 143078 | Smso10g03451 | Smso29g00311 | |
| 147018 | Smso16g01504 | Smso29g00311 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr22:58784736 | Smso29g00311 | Smso-Chr29:4991030 | dispersed | |
| Smso | Smso-Chr25:49860268 | Smso29g00311 | Smso-Chr29:4991030 | dispersed | |
| Smso | Smso-Chr29:4991030 | Smso8g02856 | Smso-Chr8:92980794 | dispersed | |
| Smso | Smso-Chr10:89996109 | Smso29g00311 | Smso-Chr29:4991030 | wgd | |
| Smso | Smso-Chr14:73173504 | Smso29g00311 | Smso-Chr29:4991030 | wgd | |
| Smso | Smso-Chr16:75619063 | Smso29g00311 | Smso-Chr29:4991030 | wgd | |
| Smso | Smso-Chr22:58762409 | Smso29g00311 | Smso-Chr29:4991030 | wgd | |
| Smso | Smso-Chr29:4991030 | Smso7g00273 | Smso-Chr7:4742861 | wgd |