Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00400	ATGGCCGGCGTTCTCGAAACCCTCACCGTTCCTCGCGCCTCCGGATTTCCGTCGGCTTCCCTAACTCCCATCGCTTCTTCTCCCATCTCTCAACTCTCCCTTCGCCGGAACTTTGCGCCGGAATCCAGAGGCTCAAAGTTAAACATCAATTCCTTCCGCTCTTCTGGATCCGTGAGCTTGAGGTCGAAGTCCGGCCTTCGTGGTGGACGAATCGTCTGCGAAGCACAGGGAGCAGCCGTACAAGTACTCCCTGTGACTGATGGAACATGGCAATCACTTGTTCTGGAATCTGATCTTCCTGTACTGGTTGAATTTTGGGCTCCATGGTGCGGGCCGTGTCGCATGATCCACCCGATCATTGATGAGCTGGCGAAGGAATTCAACGGGAAGCTCACTTGTTACAAGGTAAATACTGATGAGAGTCCTTCAATTGCTACCAGATATGGTATACGAAGCATCCCAACTGTCATCATCTTTAGAGATGGAGAGAAGAAAGATGCAGTTATTGGTGCTGTTCCGAAATCAACTCTGTGTAACTGCATTGAGAAGTTTTTATAA	558	49.82	MAGVLETLTVPRASGFPSASLTPIASSPISQLSLRRNFAPESRGSKLNINSFRSSGSVSLRSKSGLRGGRIVCEAQGAAVQVLPVTDGTWQSLVLESDLPVLVEFWAPWCGPCRMIHPIIDELAKEFNGKLTCYKVNTDESPSIATRYGIRSIPTVIIFRDGEKKDAVIGAVPKSTLCNCIEKFL	185

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00400	185	CDD	TRX-family	89	177	-	-
	Smso29g00400	185	ProSiteProfiles	Thioredoxin domain profile.	72	185	IPR013766	-
	Smso29g00400	185	Pfam	Thioredoxin	82	182	IPR013766	-
	Smso29g00400	185	FunFam	Thioredoxin	77	185	-	-
	Smso29g00400	185	NCBIfam	thioredoxin	86	184	IPR005746	GO:0015035(InterPro)
	Smso29g00400	185	ProSitePatterns	Thioredoxin family active site.	102	120	IPR017937	-
	Smso29g00400	185	Gene3D	Glutaredoxin	81	185	-	-
	Smso29g00400	185	PRINTS	Thioredoxin family signature	101	109	-	-
	Smso29g00400	185	PRINTS	Thioredoxin family signature	109	118	-	-
	Smso29g00400	185	PRINTS	Thioredoxin family signature	149	160	-	-
	Smso29g00400	185	PANTHER	GEO12009P1	67	185	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)
	Smso29g00400	185	SUPERFAMILY	Thioredoxin-like	80	185	IPR036249	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00400	K03671	thioredoxin

Event-related genes

Select	Gene_1	Gene_2	Event_name
	148199	Smso18g01669	Smso29g00400

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr17:26105031	Smso29g00400	Smso-Chr29:5991161	dispersed
	Smso	Smso-Chr29:5991161	Smso4g03245	Smso-Chr4:115691931	dispersed
	Smso	Smso-Chr18:74776290	Smso29g00400	Smso-Chr29:5991161	wgd
	Smso	Smso-Chr29:5991161	Smso7g00354	Smso-Chr7:5864144	wgd