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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00422	ATGATGGAGACACCGGTGTCGAAAAGGTTGTTGAGGAAGAAATCCCTTTCTAGAAGCTATGATGAGAATTTGATGGATGATTATTTGGATAAACAGTTAGGTAGTTCTTCTAGGAAAAGGTTTAAAACAAAGAAGGAATTGGAGAAAGAAACTGAAAAAGAAGCCATGATAGCGCTTTCTTTAGGGTTTCCGATTGATGCATTGCTTGAAGAGGAAATTAAAGCTAATGTAGTGAGTGAGTTAGATGGGAAGCAACAGAATGATTATATTGTTGTTAGAAACCATATTCTTTCGAGGTGGAGAGCTAATGTACACGCATGGCTTTCTAAAGGACAGATAAAGGAAACTGTGAGTAATGAATATGGACAGTTGATACATTCGGCTTATGATTTTTGTTTGTTTAATGGGTATATCAATTTTGGCGTTTCACCGCCGTTCAAGGCTCAGATGCCCGAGGAGGCAACCGAGGGGTCTGTTATAATCATTGGTGCAGGACTTGCTGGGTTAGCTGCTGCTTGGCAGCTGTTAGCTTTTGGTTTTAAGGTGATTGTTTTAGAAGGTAGGAACAGGCCAGGTGGAAGAGTTTATACACAAAAGATGGGTGAAAAGGATAATTATGCTGCTGTAGATCTTGGTGGTAGTGTTATTACTGGTATCCATGCAAACCCTCTTGGTGTTTTGGCTAGACAGCTTTCGATTCCTCTTCATAAAGTTAGAGATAAATGTCCATTGTATGATCCTGAAGGCTGTCCTGTTGGTGACGAAATTGATTCCAAAGTAGAGTTTATTTTTAATAGGCTTTTAGACAAAGTTACTGAATTTAGACAAATTATGGGTCAATCAGCTGCTGATATTTCCTTGGGGCTCAAATATGCAAACGCGGGCTGTCTTTCACATCTTTCTGCTGCCTATTGGGATCAAGATGATCCTTATGAAATGGGTGGCGATCATTGCTTTCTTGCAGGTGGGAATTGGAGATTAATTGAATCATTGTGTTACGGGGTTCCCATTTTCTATGAAAAAACCGTTCAAACGGTTCGATATGGTAATGAAGGTGTTGAGGTGATATGTGGGGATCAAGCATATCAAGCAGATATGGTGTTATGCACGGTTCCTCTTGGTGTTTTAAAGAAACAGACCATAAAGTTCATACCTGAATTGCCAGAAAGAAAGCTAGAAGCAATTGATAAGCTTGGATTTGGGTTGTTGAATAAGGTTGCTATGGTCTTCCCATATGTCTTTTGGGGTGAAGATTTAGATACGTTTGGCTGCCTTAGCAGGAATAGCAATACGCGGGGTGAGTTCTTTCTGTTTTACAGTTATCATACGGTTTCTGGGGGTTCATTACTTGTTGCATTGGTTGCTGGTGAAGCTGCAAGATCTTTCGAGTCTACACATCCTTCCACTTTACTACACCGTGTTTTAAGCATCCTTCGAGGTATATATGGTCCAAAGGGTGTCGATGTACCTAATCCCATCCAATCTGTTTGTACAAAATGGGGAAATGATCCCCTTTCTTATGGTTCATACTCACATGTAAGGGTGCACTCGTCGGGTAGTGATTATGACATACTTGCAGAAAATGTGGAAAATCGACTTTTTTTTGCTGGTGAAGCCACAAACCGCCAACATCCTGCCACCATGCATGGTGCTTATTTAAGTGGTTTAAGAGAAGCTTCATGCATTTATAGAGTCACAAGGGGTGATAGTAAACAAATTCATCCTAGAAAAAGCAATCGAAAAATCGTTGGAGTATGTGATATTCTTGTAAATCTGTTCAAATACCCGGATCTAGCTTTAGGGAGTTTCCATTTTGTGTTTGACCCGTCAAATGAAGACCCTAAATCATCTGGGCTTTTGATGGTTACAATCGATAGCTCAACCGAGTTAAGCAATGATAATGGGAAAGTCAACAGCAGTCAACATTCTGACAAGCAACCTTTGAAGCTTTACACGATTATATCGCGTGTACAGGCAAATGAGCTGGAATCGGTGGTAGGAGATAGTGAAAGTCTAATGACATATTTGTATAAAAACCTCGGGTTGAAATTAATGGGTTTTGACAACTTTGCCCTCATAGCAAATTCCTTGATTTCTAGTATTGCTTCAAAAAGAGGGCGGGTCAGAAATCGGATCATTTCTGGAAACCGCGTTTCACACACATGA	2166	40.21	MMETPVSKRLLRKKSLSRSYDENLMDDYLDKQLGSSSRKRFKTKKELEKETEKEAMIALSLGFPIDALLEEEIKANVVSELDGKQQNDYIVVRNHILSRWRANVHAWLSKGQIKETVSNEYGQLIHSAYDFCLFNGYINFGVSPPFKAQMPEEATEGSVIIIGAGLAGLAAAWQLLAFGFKVIVLEGRNRPGGRVYTQKMGEKDNYAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYDPEGCPVGDEIDSKVEFIFNRLLDKVTEFRQIMGQSAADISLGLKYANAGCLSHLSAAYWDQDDPYEMGGDHCFLAGGNWRLIESLCYGVPIFYEKTVQTVRYGNEGVEVICGDQAYQADMVLCTVPLGVLKKQTIKFIPELPERKLEAIDKLGFGLLNKVAMVFPYVFWGEDLDTFGCLSRNSNTRGEFFLFYSYHTVSGGSLLVALVAGEAARSFESTHPSTLLHRVLSILRGIYGPKGVDVPNPIQSVCTKWGNDPLSYGSYSHVRVHSSGSDYDILAENVENRLFFAGEATNRQHPATMHGAYLSGLREASCIYRVTRGDSKQIHPRKSNRKIVGVCDILVNLFKYPDLALGSFHFVFDPSNEDPKSSGLLMVTIDSSTELSNDNGKVNSSQHSDKQPLKLYTIISRVQANELESVVGDSESLMTYLYKNLGLKLMGFDNFALIANSLISSIASKRGRVRNRIISGNRVSHT	721

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00422	721	Pfam	SWIRM domain	69	140	IPR007526	GO:0005515(InterPro)
	Smso29g00422	721	Gene3D	-	342	513	-	-
	Smso29g00422	721	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	158	180	-	-
	Smso29g00422	721	PRINTS	Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature	530	545	-	-
	Smso29g00422	721	SUPERFAMILY	FAD-linked reductases, C-terminal domain	399	511	-	-
	Smso29g00422	721	Pfam	Flavin containing amine oxidoreductase	289	562	IPR002937	GO:0016491(InterPro)
	Smso29g00422	721	Pfam	Flavin containing amine oxidoreductase	166	242	IPR002937	GO:0016491(InterPro)
	Smso29g00422	721	SUPERFAMILY	Homeodomain-like	50	151	IPR009057	-
	Smso29g00422	721	PANTHER	FLAVIN MONOAMINE OXIDASE	62	563	IPR050281	GO:0016491(PANTHER)
	Smso29g00422	721	SUPERFAMILY	FAD-NAD(P)-binding domain	155	564	IPR036188	-
	Smso29g00422	721	Gene3D	-	53	151	IPR036388	-
	Smso29g00422	721	Gene3D	-	152	281	IPR036188	-
	Smso29g00422	721	Gene3D	-	514	580	IPR036188	-
	Smso29g00422	721	ProSiteProfiles	SWIRM domain profile.	48	149	IPR007526	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00422	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr29:6305931	Smso4g00771	Smso-Chr4:10080127	dispersed
	Smso	Smso-Chr21:7991738	Smso29g00422	Smso-Chr29:6305931	wgd
	Smso	Smso-Chr29:6305931	Smso7g00374	Smso-Chr7:6177385	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Smso	Amino_oxidase	1.9e-67	CL0063		TR	SWI/SNF-SWI3