Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00439 | ATGCAACCCCAGCAAACCCTACCGCCGGAATCTGACCTACCGTCTCTCGCCGCCATCAAAATCAAATCATCATCCCCTCGTTTCCGTCCTACAGCCAATCCTTCCGCCACCGAAACCCCCACCGCCGGCGCCCAACGCAGGATAGGCATCGCCGTTGATCTCAGCGACGAGAGTGCCTTCGCCGTTAAGTGGGCCGTCAATCAGTATCTCCGCCCCGGCGACGCCGTGATCCTCATCCACGTCCGTCCTACTTCCGTCCTCTACGGCGCTGACTGGGGCTCCGTTGACCTTTCAATCGTTGACACTGACAACGAAGAATCGAAGCTTAAACTCGAAGACGAGTTTGATACTTTCACAACTACGAAATCCGCTGATCTAGCACAGCCTCTGGTGGACGCGCACATACCGTATAAGATCCATATTGTTAAAGATCATGACATGAAGGAGAGGCTTTGTTTGGAGGTGGAGAGGCTAGGGTTAAGTGCTGTTATTATGGGGAGCCGAGGGTTTGGTGCGACGAAACGCGGGAGCGATGGGCGGCTTGGGAGTGTTAGTGATTACTGTGTGCGCCACTGTGTGTGTCCGGTGGTGGTTGTGAGGTATCCTGATGAGAAGGATGCTGCTGCGTCTGCTGAGCCTATTGTTTCGGTTGCTACGGCTGATGATGAAGAAGACGAGCCTGAATATCATGATGCGACTGATGAGCGAAAATGTTAG | 717 | 53.84 | MQPQQTLPPESDLPSLAAIKIKSSSPRFRPTANPSATETPTAGAQRRIGIAVDLSDESAFAVKWAVNQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDNEESKLKLEDEFDTFTTTKSADLAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGSDGRLGSVSDYCVRHCVCPVVVVRYPDEKDAAASAEPIVSVATADDEEDEPEYHDATDERKC | 238 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00439 | 238 | Pfam | Universal stress protein family | 46 | 200 | IPR006016 | - | |
| Smso29g00439 | 238 | MobiDBLite | consensus disorder prediction | 212 | 238 | - | - | |
| Smso29g00439 | 238 | MobiDBLite | consensus disorder prediction | 23 | 44 | - | - | |
| Smso29g00439 | 238 | CDD | USP-Like | 47 | 199 | - | - | |
| Smso29g00439 | 238 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 46 | 203 | - | - | |
| Smso29g00439 | 238 | PRINTS | Universal stress protein signature | 45 | 63 | IPR006015 | - | |
| Smso29g00439 | 238 | PRINTS | Universal stress protein signature | 178 | 200 | IPR006015 | - | |
| Smso29g00439 | 238 | PANTHER | OS01G0783500 PROTEIN | 9 | 237 | IPR044162 | - | |
| Smso29g00439 | 238 | MobiDBLite | consensus disorder prediction | 26 | 42 | - | - | |
| Smso29g00439 | 238 | Gene3D | HUPs | 35 | 212 | IPR014729 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00439 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Smso | Smso-Chr19:70133286 | Smso29g00439 | Smso-Chr29:6525069 | dispersed | |
| Smso | Smso-Chr29:6525069 | Smso2g00889 | Smso-Chr2:13526065 | dispersed | |
| Smso | Smso-Chr29:6525069 | Smso7g00392 | Smso-Chr7:6443862 | wgd |