Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Smso29g00582 | ATGGAGGCATGTCTCTCTCGATCGATTTCATTCCAGACTCCGCCATTCTCTCTCCAAAACCTAAATATCTCTGTTACTTCTCTCTACGATCGTAACGACTCGCTGCTTCATCTTCCCCTTTCTATTTCGCTGCAATTAAGAACAGGAATTATTGGATTTGAATCTCTCTATCGCGTGCAAACCCTAAGGTTTTACACGATGGAGGATATGTTTGTGGCAATTCTTTCAATGCTTCTTCTTGTTGCCCTTGTTCCACTTTATCTATGGAAACGCCGTCAGGCTCCGCAGTCTAGTGATGAACACGAAGAACAACCGCAGATTCAGCAGAGAGAAACTGTTGTAAGACCTACTGGTGCGCGTAGCAGGATGCGCAGAAGGCATACTTCAGGAGCTAGCACATCTTCTGCTCCGCAAACTGTAGAAGCGGAAATTGAGGATGGAAGTGATGAAGAAGCTGTTGAAGGGGAATATTATAATGCAAGAACTTCAAAGAAGAAAGGAAGGAAGAAAGAGGAACGCCAAGCACAACGCCAGGCTGAAGAGGCTGCAAGGGAGTCAAGAAATACCAAACAAGATCGTTATGCAGAAATGCGCAGGAGGAAAGATGAGGAACATGAAGCAAGGGAACGGATGCTGGAAGAAGAAGCCGAGGCTCGAAAGGCCAAAGAGGAGGAAGCAACAGCTTTAGAGTTTGAGAAATGGAAAGGGGAATTTTCAGTAGATGCTGAAGGTACTACAGAAAATGAAGTTCAAGATGGAACCCAGGGTTTGCTTTTTGATTTTGTGGAGTACATTAAGAAACAGAAATGTATTCCGTTGGAAGATCTTGCTGCAGAATTTAAACTAAGGACTCAGGACTGTATCAATCGAATAACCTCATTGGAAGATATGGGGAGATTGTCGGGTGTGATGGACGATAGAGGAAAATACATATACATCTCACATGAAGAAATGCAGGCAGTTGCAGACTATATCAAGCGTGAAGGTCGGGTCAGCATTGCACATTTAGCAAGCCAATCAAACCAGTTCATAGATCTGGAACCCAAATCACAGTTTGTTGAGGATTTAGGCACTACAGAGGAGATTGCAGTTGCTTAA | 1098 | 43.81 | MEACLSRSISFQTPPFSLQNLNISVTSLYDRNDSLLHLPLSISLQLRTGIIGFESLYRVQTLRFYTMEDMFVAILSMLLLVALVPLYLWKRRQAPQSSDEHEEQPQIQQRETVVRPTGARSRMRRRHTSGASTSSAPQTVEAEIEDGSDEEAVEGEYYNARTSKKKGRKKEERQAQRQAEEAARESRNTKQDRYAEMRRRKDEEHEARERMLEEEAEARKAKEEEATALEFEKWKGEFSVDAEGTTENEVQDGTQGLLFDFVEYIKKQKCIPLEDLAAEFKLRTQDCINRITSLEDMGRLSGVMDDRGKYIYISHEEMQAVADYIKREGRVSIAHLASQSNQFIDLEPKSQFVEDLGTTEEIAVA | 365 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Smso29g00582 | 365 | Pfam | DDRGK domain | 161 | 345 | IPR019153 | - | |
| Smso29g00582 | 365 | PANTHER | DDRGK DOMAIN-CONTAINING PROTEIN 1 | 154 | 361 | IPR050899 | - | |
| Smso29g00582 | 365 | MobiDBLite | consensus disorder prediction | 172 | 225 | - | - | |
| Smso29g00582 | 365 | MobiDBLite | consensus disorder prediction | 96 | 225 | - | - | |
| Smso29g00582 | 365 | Coils | Coil | 194 | 232 | - | - | |
| Smso29g00582 | 365 | FunFam | DDRGK domain-containing protein 1 | 256 | 313 | - | - | |
| Smso29g00582 | 365 | Coils | Coil | 165 | 192 | - | - | |
| Smso29g00582 | 365 | Gene3D | - | 256 | 313 | IPR036388 | - | |
| Smso29g00582 | 365 | SMART | DDRGK-2 | 160 | 345 | IPR019153 | - | |
| Smso29g00582 | 365 | SUPERFAMILY | Winged helix DNA-binding domain | 252 | 321 | IPR036390 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Smso29g00582 | K23344 | DDRGK domain-containing protein 1 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 337118 | Smso29g00582 | Smso7g00444 | |
| 353819 | Smso7g00444 | Smso29g00582 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 5096966 | Smso | Smso29g00582 | Smso-Chr29:8510348 | Smso7g00444 | Smso-Chr7:7577063 |