AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00614 ATGACAGACAAAGCTTCAGATTTTTTAACGGAAAAATCACATATATTCTCGGAGCTGCTAAGAATGGACCCAGTGAACCAAGAAGCAAGGCCCAGTGACACACTAGTTGGTCCTGAAAAGCGAAAACGTGGCCGCCCACGAAAGGATCCGAGTGAAAAACGGGCCCAAAGAGCCCGTTCACAAGCGGCTGCTCGCATGTCACGTGGTTTTGGACAACCGACTAACAACACTCCTCTAGTTGACCTGATCAATGATCCAACTGAAGTTATGGTCGGACAGATTGTAACTGGTGTTGTTCAGGCAACTTTTGATGCGGGTTATCTGCTCGCGGTTAGGATTGGGAACTCAAATATAACACTAACGGGTGCAGTTTTCAAACCGGGCCACACTGCACCCGTGACGCCTGAAAATGACGTGGCACCTCATGTTGAAATGATCAACCGAACCCAAATTCCGTTTCCAACAGAACTCCAGCCCAAACGTAGGCGTAAGCGAAGATCAAAAGAGAAAAACATGCAACTTGTTACTTATGTTGGAAATGGGCCAGACTCTGTTGCAACAAATTCATCATCTAAGACTGACTATGTGCTACCCTCTTCGGTCCCACAGGTTGGTGCAAGAGGGACCGTGATCCCTGTTGTTCTTCAACCAATTAACCTATCAAATGGTTTATCCACCAACCAACCCGCACCTCATTTGCGGGCCTCACAAGGCAAACCGGTGCACTCGGTTCTGCCGTTGGCTGTTTACCCGCCAAACAGGCCAACAAGTCAAGCGTCTGATTCTCAAACTAGCTCACAGTTTACAGTTGCACCCTCAGGGTCTGGAAATGAGAATGCTTCATTTAAACACACAGAAGGGGGTAAAACTGTAAAATCAAGTGATGTGCAAGATCAAGTTGTGAAAACAGAATCAGATATTGGCGATATGAACGAGCCTCTTTTTGTTGAACCCTTGCAAACTCGACACACCGTTCAACATTTCCAACATCCTCCAGTATTGGGAGGTGTGATGCATGGTGGGACTGGGAGAATGACACAGCTTTTGCAGGCTGTTCAGCAGAAAATGGGCGATGACCAGGTTTCTCGAAATGGTCAGGCAGGAAGGATGTAA 1113 47.17 MTDKASDFLTEKSHIFSELLRMDPVNQEARPSDTLVGPEKRKRGRPRKDPSEKRAQRARSQAAARMSRGFGQPTNNTPLVDLINDPTEVMVGQIVTGVVQATFDAGYLLAVRIGNSNITLTGAVFKPGHTAPVTPENDVAPHVEMINRTQIPFPTELQPKRRRKRRSKEKNMQLVTYVGNGPDSVATNSSSKTDYVLPSSVPQVGARGTVIPVVLQPINLSNGLSTNQPAPHLRASQGKPVHSVLPLAVYPPNRPTSQASDSQTSSQFTVAPSGSGNENASFKHTEGGKTVKSSDVQDQVVKTESDIGDMNEPLFVEPLQTRHTVQHFQHPPVLGGVMHGGTGRMTQLLQAVQQKMGDDQVSRNGQAGRM 370
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00614 370 MobiDBLite consensus disorder prediction 250 295 - -
Smso29g00614 370 MobiDBLite consensus disorder prediction 253 295 - -
Smso29g00614 370 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 22 364 IPR045881 -
Smso29g00614 370 MobiDBLite consensus disorder prediction 20 77 - -
Smso29g00614 370 MobiDBLite consensus disorder prediction 34 59 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00614 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337134 Smso29g00614 Smso7g00462
353835 Smso7g00462 Smso29g00614
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4981742 Smso Smso26g01733 Smso-Chr26:29625287 Smso29g00614 Smso-Chr29:8789248
4986375 Smso Smso29g00614 Smso-Chr29:8789248 Smso4g01927 Smso-Chr4:29263274
5096981 Smso Smso29g00614 Smso-Chr29:8789248 Smso7g00462 Smso-Chr7:7786794