AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00616 ATGGCTGATTTCGACGCACCTTCATTCTCATTAGGGCTTGATTGTGACCTATTCGACTCGGAGCCCCAAATTACTCCTGTAACTCATGAAACACATCCTTCTTCTTCTTCGAATCCGTTCTCTGTAGCTTCTGCAACGTTCAAAGACGAAGATGACGAATTTGAAACCCTAATTGTCGACGACTCGGAGCCTGAATTTCCGGATTCACGTCCGAAGCTGAAGCGCCTCCGGCGTTGCCTCACCACAAGTTCCACGTCATCATCGGTTCCGGCCAAGGCCAAGTCGGAGTTGCATTCTACGGCGGTTATTGATGATGAAGATACAGATCAACATCTTCATACACAACACCATGTGGTCTGTACCAGTTTAAATTTACCACCAAGTAGACCAGGGGCTTTGACAGTAAAGAAGAAGCAACACCTTTCAAATGACCGAGAGACGGTTTCAACAGATTCCGATGCGGATTCTTGTGATCCGGTTGTCGGTAGGAAATGTAATGGATCAGATTTGAATTCAAATCTTGGGAAGTATGATGATCTTCATCAACATGTAAAGAGAATGCAAAATGTTTCAAATGCATGGGGAGATTTCCCCAAGGCTTATCGTTACTTTTTTCATGATGATTCGAGGATCCAAGAGCTTGTTCGAAGTCGCCTACCTAATTTTTCGCCTTTGGGTAACTTGTTAAACATAGATCTTGAGCAGCCGGGTACATCAAAGATTGATTATATGGGACAGTTTAGGTTTGGTGAAAGCTCAAAACAAGCTGCTAGAACTGTTAAAAACAAGAGAAGTTCACCTAGCAGGAAAATTTCAAGAAAATCAGAAACTGAGATGTCACAAGGTTGGGTGAATCCGAAGCTTGGTGTTGGTAAGGTGACAACAAAAGGAGCTGTGAAACGAAAGGCTCATACAGCCCGCCAAACTGCTGGTCATTGGTTAACGGGTTCGGATGGAAAGAAAGTCTATGTCGGCAAAAGGGGTCAGGAGTTGATGGGCCGAGTTGCATACATGCAGTACAAAAAGGAGAGTGGACTAGGGTTTAAAAAGGTAAAGAGGAAATCTGTTAACAAGAAGAAGAAATGA 1086 43.65 MADFDAPSFSLGLDCDLFDSEPQITPVTHETHPSSSSNPFSVASATFKDEDDEFETLIVDDSEPEFPDSRPKLKRLRRCLTTSSTSSSVPAKAKSELHSTAVIDDEDTDQHLHTQHHVVCTSLNLPPSRPGALTVKKKQHLSNDRETVSTDSDADSCDPVVGRKCNGSDLNSNLGKYDDLHQHVKRMQNVSNAWGDFPKAYRYFFHDDSRIQELVRSRLPNFSPLGNLLNIDLEQPGTSKIDYMGQFRFGESSKQAARTVKNKRSSPSRKISRKSETEMSQGWVNPKLGVGKVTTKGAVKRKAHTARQTAGHWLTGSDGKKVYVGKRGQELMGRVAYMQYKKESGLGFKKVKRKSVNKKKK 361
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00616 361 MobiDBLite consensus disorder prediction 138 152 - -
Smso29g00616 361 MobiDBLite consensus disorder prediction 134 156 - -
Smso29g00616 361 MobiDBLite consensus disorder prediction 24 42 - -
Smso29g00616 361 MobiDBLite consensus disorder prediction 254 280 - -
Smso29g00616 361 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 154 - -
Smso29g00616 361 MobiDBLite consensus disorder prediction 20 42 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00616 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
148233 Smso18g01741 Smso29g00616
153441 Smso29g00616 Smso9g00567
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
4978731 Smso Smso25g00667 Smso-Chr25:13626283 Smso29g00616 Smso-Chr29:8820023
4986377 Smso Smso29g00616 Smso-Chr29:8820023 Smso9g00567 Smso-Chr9:13173693
5069242 Smso Smso18g01741 Smso-Chr18:75615261 Smso29g00616 Smso-Chr29:8820023