AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00620 ATGACAAAAAAAAGGCGGTCGCCGGCAACAGCAAGGGAAAATATCACTCCCCAAATTTATACCGATCGTCGGGAATCTCTCCGGAACTCCGATTCGGACCAGGCGATTTTACACCGTTTGATGGATAGAGGCAAGGAATTGGAATCCGTACAGACATCCGTTCAGAATATCGATTTGAATTGCAATTCTAAGAACCCTAGCAAGTTTTCCAACCGTTATAATCTTTCGCTGCAATCATCCTGGTCACCTTTAGTGAAGAGAAAACCGCCTGCTCTGGTAAGCTTATGTCTTGGAATAATAGGCAAGCATCTTGATGATGTTATTGAAGATTTAGAGGTTTTAAGCAGTTTCCCGCCAGACGTTAAGATGGCCATTACAGCCATTGCAAGAAGAAGAAAGTTGCTAAATGATGACGTCATCATTGCATTGGCAGACAGCTCATGGGAAGTTGTTGATTTATCAGATTCAGAAGTCACGGATATTGGCTTGTTGAAAGTGATAGAGATTTGCAATCATGTGAGAGCCATGGGCATAAGTCGTTGCAGCAATATCACTTCATTTGGTGTTTCAGAACTTGTGAAGCATTGTCATTGTCTTGAGATATTGAGATGGGGAGGATGTCCTAGAAGTGAACAAACTGCACGAAGCTCTTTAAGCATCTTGAAACCAACATTAAACAATGTTGAAGAGGATTCATGGGAAGAACTTGATGCCACAGAGATTGTACATGGAGCACAGTCGTTACGTTGGCTCGTATGGCCAAAAATTGATAAAGATTCATTGGAGAGTCTATCAATGGAATGCCCCCGTATTATAGTGAATCCAAAACCATCACTGTTTGGCCACAAAGGGATTGATATTCCTAAAAGTGCATTACCTGGTGTTCCTTTGGATGACTTTGTTGTAGAAGACATTGACCCAAAAACTTGGGTAGTTCCAGGAACTAGAGTTAGGACAACACAACCTGTTTTGAGCTCAATTGAGATGCCTATTGCTGAAAGATTTAGACTTGCATTTGTTGAAAGGGATGCAAGAATGGCGCCAAAACGGGCCAAAAATGCTAGACAACGACAGCGACGGGCTGTGAGAGAGTGGTTGACAACAAGTACTAGTGCAAAGTCAGTTTTGCTTGCCTCACAAATGAGCAAAAATCTACACAGTTAG 1164 42.1 MTKKRRSPATARENITPQIYTDRRESLRNSDSDQAILHRLMDRGKELESVQTSVQNIDLNCNSKNPSKFSNRYNLSLQSSWSPLVKRKPPALVSLCLGIIGKHLDDVIEDLEVLSSFPPDVKMAITAIARRRKLLNDDVIIALADSSWEVVDLSDSEVTDIGLLKVIEICNHVRAMGISRCSNITSFGVSELVKHCHCLEILRWGGCPRSEQTARSSLSILKPTLNNVEEDSWEELDATEIVHGAQSLRWLVWPKIDKDSLESLSMECPRIIVNPKPSLFGHKGIDIPKSALPGVPLDDFVVEDIDPKTWVVPGTRVRTTQPVLSSIEMPIAERFRLAFVERDARMAPKRAKNARQRQRRAVREWLTTSTSAKSVLLASQMSKNLHS 387
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00620 387 Gene3D Ribonuclease Inhibitor 122 250 IPR032675 -
Smso29g00620 387 MobiDBLite consensus disorder prediction 1 27 - -
Smso29g00620 387 SUPERFAMILY RNI-like 146 235 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00620 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
337138 Smso29g00620 Smso7g00468
353839 Smso7g00468 Smso29g00620
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr29:8869283 Smso7g00470 Smso-Chr7:7937094 dispersed
Smso Smso-Chr29:8869283 Smso7g00468 Smso-Chr7:7922888 wgd