Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g00624	ATGGGTACTGTAGTCCCTACCCTAATCAAGAACGTAGAAAACCAGAAATCAATCAATAAAGAGACCAACACAACTGCAATTCCCAATTGGTTTCACAAAAATTCTCAAAACCCTAATCGGATCTACTCATCTGCGTTCATCACTACGGCCAGAAGCTCCTTCAAACTCGAGCATCCCCTCGAGAGGCGTCAAGTCGAGGCTGCTCGTATCAGGGAAAAGTATCCTGACAGAATCCTGGTTATTGTGGAGAAGGCTGAAAGGACCGACATACCCGACATAGACAAAAAGAAATATCTGGTGCCTGCTGATCTTACTGTTGAACAGTTCGTTTATGTGGTGAGGAAGAGGATTAAGCTAAGTGCTGAAAAAGCCATCTTTATCTTTGTGAAGAACATTATGCCACCTACTGCTGCCATGATGTCTGCTTTCTACGAAGAAAATAAAGACGAGGATGGGTTCCTTTACATGACGTGGGGAGAATACGTTTGGAACACGTTGAAGTCGGGTGCTAACCGTGCGATGGAAGGTGAATAA	534	44.19	MGTVVPTLIKNVENQKSINKETNTTAIPNWFHKNSQNPNRIYSSAFITTARSSFKLEHPLERRQVEAARIREKYPDRILVIVEKAERTDIPDIDKKKYLVPADLTVEQFVYVVRKRIKLSAEKAIFIFVKNIMPPTAAMMSAFYEENKDEDGFLYMTWGEYVWNTLKSGANRAMEGE	177

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g00624	177	SUPERFAMILY	Ubiquitin-like	51	158	IPR029071	-
	Smso29g00624	177	Gene3D	-	36	162	-	-
	Smso29g00624	177	CDD	Ubl-ATG8	60	160	-	-
	Smso29g00624	177	PANTHER	MICROTUBULE-ASSOCIATED PROTEINS 1A-1B LIGHT CHAIN 3-RELATED	52	158	IPR004241	GO:0006995(PANTHER)
	Smso29g00624	177	Pfam	Autophagy protein Atg8 ubiquitin like	62	159	IPR004241	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g00624	K08341	GABA(A) receptor-associated protein

Event-related genes

Select	Gene_1	Gene_2	Event_name
	337142	Smso29g00624	Smso7g00473
	353843	Smso7g00473	Smso29g00624

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	4986384	Smso	Smso29g00624	Smso-Chr29:8898922	Smso3g02105	Smso-Chr3:108736062
	5093970	Smso	Smso27g00312	Smso-Chr27:4730896	Smso29g00624	Smso-Chr29:8898922
	5096518	Smso	Smso29g00624	Smso-Chr29:8898922	Smso3g00322	Smso-Chr3:5560614
	5096989	Smso	Smso29g00624	Smso-Chr29:8898922	Smso7g00473	Smso-Chr7:7987187