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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Smso29g00637 ATGTTGCTTCATAGTTTTAGCTTTTCTTCTCGATTATTACAGTCCACAAGTCAAAGCGTCAGAATCGATTACGAGGCTAATCATCTGTGCTCAAGAAGACGAAATCTCACGGTTTCTTCAACGCTCGCATCTCTCAGATTTGGAACAGATGTAATCGTTGAAATAGCTCACAATAAGCCGCTGATAGCAGCAACGCTATGTGCTGCAGCTGGACAATTGGCAAAACCTTTTATGGCTTCCATTTTGTATCGAAGAGATTTCGACCCAAAAGCTGCAATTTCAGCTGGAGGGTTTCCTTCAACCCATTCTTCTGCAGCTGTGGTTACTGCAATGTCTATCGGTCTGGAAAGGGGTTTCTCGGATTCTATTTTTGGATTTGCAGTTGTCTACGCTGCTCTTACCATGTATGATGCACAGGGTGTTAGAAGGGAAGTGGGAGTTCATGCAAGAACATGA 456 43.42 MLLHSFSFSSRLLQSTSQSVRIDYEANHLCSRRRNLTVSSTLASLRFGTDVIVEIAHNKPLIAATLCAAAGQLAKPFMASILYRRDFDPKAAISAGGFPSTHSSAAVVTAMSIGLERGFSDSIFGFAVVYAALTMYDAQGVRREVGVHART 151
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Smso29g00637 151 Pfam Divergent PAP2 family 57 150 IPR003832 -
Smso29g00637 151 PANTHER ACID PHOSPHATASE-VANADIUM-DEPENDENT HALOPEROXIDASE-RELATED PROTEIN 46 150 IPR003832 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Smso29g00637 K09775 uncharacterized protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
337147 Smso29g00637 Smso7g00489
353848 Smso7g00489 Smso29g00637
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Smso Smso-Chr29:9024288 Smso7g00489 Smso-Chr7:8181599 transposed