Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Smso29g01632	ATGACCTCTATACAGAACAATCAAGAAACTATGCAAAAGAACTGTGAGGCCCTGGCACCAAGCCTCCAGAGCAATGGACCCCAGCAGTATAATGGGAGTCCTATGGAAGGGTTTATAGAACATAATAATGATTCAAATTTCGTAGAACTAGACCAAAATGAATTGCTAGAGTCGTCAGTTGAACCCAACAAAAAACCTGCCTACCTTGGTCCATGGTCTTTGCATCCTGACATCAAAAAGGCACAGCTTTGCCAGTTGAATAATATTGAAGGCCAGTTTTACCCTTTCTTGGTGAATAGCAGGGTTCATTATGCCCCATTTACCATGTTCCCTCATAGTTACCCCTATGGTTATCAACATCAAGAGTTCCATTATTTTGTTGTCATTGATTTTGAGGCTACATGCGATAAGGAAAGGAATCCTCATCCCCAGGAGATCATCGAGTTCCCTTCAGTTATAGTGAGTAGTTTGACTGGTCAACTGGAAGCTTGTTTCCAAACATATGTTCGTCCAACATGCAATAAGCTTTTAAGTGATTTTTGCAAGGATTTGACTGGTATCCAGCAAATTCAGGTGGATGGAGGAGTTACTCTTAGTGAAGCTCTTCTACGACATGACAAATGGCTGGAGAGGAAGGGGATAAAAAATGCCAACTTTGCTGTGGTTACATGGTCAAACTGGGACTGTAGAGTCATGTTAGAATCAGAATGCAGATTCAAGAAAATTCGTAAGCCTCCTTATTTTAACCAATGGATCAACTTAAAAGTTCCATTCTGTGAGGTTTATGGAGGTGCAAAATGCAACTTGAAGGAGGCAGTCGAGATGGCGGGGCTATCATGGCAGGGTCGGCCTCACTGTGGGTTAGATGATGCCAAGAACACCGCCCGCCTACTTGCTCTCATGATGCACAAGGGTTCCAAGTTCTCAATCACCAATTCCTTGATGTGCCACCCCACAGACCACCACCATGCTTTCACTTGGAAACCACCACTTGTACGCATGCCTTTTCCGCCATACCACCACCACCACCTGCCGCCTCACAAACCAAAGGATCTGCATTTCTTTCCAATATTTCATCCTTGCTGTTACTGTGGGGTGAAAAGCAGTAAAGGGATGGTTCAGAAACCAGGCCCCAAACAAGGCAGCTGCTTCTTTGGGTGCGGCAATTGGACTTATGCTAAAGGGGCTCGTTGCCAGTACTTCGAATGGGCTTGA	1215	44.69	MTSIQNNQETMQKNCEALAPSLQSNGPQQYNGSPMEGFIEHNNDSNFVELDQNELLESSVEPNKKPAYLGPWSLHPDIKKAQLCQLNNIEGQFYPFLVNSRVHYAPFTMFPHSYPYGYQHQEFHYFVVIDFEATCDKERNPHPQEIIEFPSVIVSSLTGQLEACFQTYVRPTCNKLLSDFCKDLTGIQQIQVDGGVTLSEALLRHDKWLERKGIKNANFAVVTWSNWDCRVMLESECRFKKIRKPPYFNQWINLKVPFCEVYGGAKCNLKEAVEMAGLSWQGRPHCGLDDAKNTARLLALMMHKGSKFSITNSLMCHPTDHHHAFTWKPPLVRMPFPPYHHHHLPPHKPKDLHFFPIFHPCCYCGVKSSKGMVQKPGPKQGSCFFGCGNWTYAKGARCQYFEWA	404

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Smso29g01632	404	SUPERFAMILY	Ribonuclease H-like	123	312	IPR012337	-
	Smso29g01632	404	ProSiteProfiles	Zinc finger GRF-type profile.	362	404	IPR010666	GO:0008270(InterPro)
	Smso29g01632	404	FunFam	Exonuclease domain-containing protein 1	117	335	-	-
	Smso29g01632	404	CDD	ERI-1-3'hExo-like	126	302	IPR047201	GO:0000175(InterPro)
	Smso29g01632	404	Gene3D	-	117	329	IPR036397	GO:0003676(InterPro)
	Smso29g01632	404	PANTHER	3'-5' EXONUCLEASE ERI1-RELATED	118	380	IPR051274	-
	Smso29g01632	404	SMART	exoiiiendus	125	307	IPR013520	-
	Smso29g01632	404	Pfam	Exonuclease	127	298	IPR013520	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Smso29g01632	K18417	ERI1 exoribonuclease 2 [EC:3.1.-.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Smso	Smso-Chr1:114337270	Smso29g01632	Smso-Chr29:43466756	dispersed
	Smso	Smso-Chr1:114332222	Smso29g01632	Smso-Chr29:43466756	transposed
	Smso	Smso-Chr20:62528655	Smso29g01632	Smso-Chr29:43466756	wgd